Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
HLA-DRB4X5D2U9 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
HLA-DRB4X5D2U9 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
HLA-DRB4X5D2U9 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DRB4X5D2U9 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC14.08□□□□□ -0.16
HLA-DRB4X5D2U9 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DRB4X5D2U9 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DRB4X5D2U9 PCDHB18P-201ENST00000524813 2368 ntBASIC14.08□□□□□ -0.16
HLA-DRB4X5D2U9 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DRB4X5D2U9 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DRB4X5D2U9 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC14.08□□□□□ -0.16
HLA-DRB4X5D2U9 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DRB4X5D2U9 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
HLA-DRB4X5D2U9 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DRB4X5D2U9 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DRB4X5D2U9 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DRB4X5D2U9 MESTP1-201ENST00000404287 994 ntBASIC14.08□□□□□ -0.16
HLA-DRB4X5D2U9 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DRB4X5D2U9 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC14.08□□□□□ -0.16
HLA-DRB4X5D2U9 AL355355.2-201ENST00000442321 338 ntBASIC14.08□□□□□ -0.16
HLA-DRB4X5D2U9 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC14.08□□□□□ -0.16
HLA-DRB4X5D2U9 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DRB4X5D2U9 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC14.08□□□□□ -0.16
HLA-DRB4X5D2U9 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC14.08□□□□□ -0.16
HLA-DRB4X5D2U9 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC14.08□□□□□ -0.16
HLA-DRB4X5D2U9 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DRB4X5D2U9 AP000692.2-201ENST00000608391 879 ntBASIC14.08□□□□□ -0.16
HLA-DRB4X5D2U9 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DRB4X5D2U9 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC14.08□□□□□ -0.16
HLA-DRB4X5D2U9 AC135050.7-201ENST00000624508 2218 ntBASIC14.08□□□□□ -0.16
HLA-DRB4X5D2U9 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DRB4X5D2U9 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DRB4X5D2U9 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC14.08□□□□□ -0.16
HLA-DRB4X5D2U9 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC14.08□□□□□ -0.16
HLA-DRB4X5D2U9 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DRB4X5D2U9 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC14.08□□□□□ -0.16
HLA-DRB4X5D2U9 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
HLA-DRB4X5D2U9 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DRB4X5D2U9 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DRB4X5D2U9 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DRB4X5D2U9 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC14.08□□□□□ -0.16
HLA-DRB4X5D2U9 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HLA-DRB4X5D2U9 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC14.07□□□□□ -0.16
HLA-DRB4X5D2U9 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DRB4X5D2U9 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
HLA-DRB4X5D2U9 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC14.07□□□□□ -0.16
HLA-DRB4X5D2U9 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DRB4X5D2U9 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DRB4X5D2U9 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DRB4X5D2U9 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DRB4X5D2U9 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DRB4X5D2U9 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC14.07□□□□□ -0.16
HLA-DRB4X5D2U9 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DRB4X5D2U9 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DRB4X5D2U9 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC14.07□□□□□ -0.16
HLA-DRB4X5D2U9 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DRB4X5D2U9 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DRB4X5D2U9 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DRB4X5D2U9 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DRB4X5D2U9 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DRB4X5D2U9 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC14.07□□□□□ -0.16
HLA-DRB4X5D2U9 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC14.07□□□□□ -0.16
HLA-DRB4X5D2U9 AC008040.2-201ENST00000461049 708 ntBASIC14.07□□□□□ -0.16
HLA-DRB4X5D2U9 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DRB4X5D2U9 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DRB4X5D2U9 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DRB4X5D2U9 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DRB4X5D2U9 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC14.07□□□□□ -0.16
HLA-DRB4X5D2U9 CKBP1-201ENST00000565489 1086 ntBASIC14.07□□□□□ -0.16
HLA-DRB4X5D2U9 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC14.07□□□□□ -0.16
HLA-DRB4X5D2U9 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC14.07□□□□□ -0.16
HLA-DRB4X5D2U9 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC14.07□□□□□ -0.16
HLA-DRB4X5D2U9 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC14.07□□□□□ -0.16
HLA-DRB4X5D2U9 AC026471.5-201ENST00000615068 467 ntBASIC14.07□□□□□ -0.16
HLA-DRB4X5D2U9 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DRB4X5D2U9 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DRB4X5D2U9 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DRB4X5D2U9 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DRB4X5D2U9 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DRB4X5D2U9 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DRB4X5D2U9 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DRB4X5D2U9 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DRB4X5D2U9 USP39-202ENST00000409025 1946 ntTSL 5 BASIC14.07□□□□□ -0.16
HLA-DRB4X5D2U9 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC14.07□□□□□ -0.16
HLA-DRB4X5D2U9 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
HLA-DRB4X5D2U9 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC14.07□□□□□ -0.16
HLA-DRB4X5D2U9 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
HLA-DRB4X5D2U9 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
HLA-DRB4X5D2U9 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DRB4X5D2U9 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DRB4X5D2U9 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC14.07□□□□□ -0.16
HLA-DRB4X5D2U9 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DRB4X5D2U9 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DRB4X5D2U9 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DRB4X5D2U9 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HLA-DRB4X5D2U9 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DRB4X5D2U9 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DRB4X5D2U9 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DRB4X5D2U9 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HLA-DRB4X5D2U9 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms