Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HRH3Q9Y5N1 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HRH3Q9Y5N1 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.24■□□□□ 0.35
HRH3Q9Y5N1 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HRH3Q9Y5N1 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HRH3Q9Y5N1 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
HRH3Q9Y5N1 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HRH3Q9Y5N1 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
HRH3Q9Y5N1 GPAT2P1-201ENST00000444924 1672 ntBASIC17.23■□□□□ 0.35
HRH3Q9Y5N1 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.23■□□□□ 0.35
HRH3Q9Y5N1 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HRH3Q9Y5N1 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HRH3Q9Y5N1 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
HRH3Q9Y5N1 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
HRH3Q9Y5N1 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HRH3Q9Y5N1 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
HRH3Q9Y5N1 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HRH3Q9Y5N1 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HRH3Q9Y5N1 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.23■□□□□ 0.35
HRH3Q9Y5N1 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.23■□□□□ 0.35
HRH3Q9Y5N1 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HRH3Q9Y5N1 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HRH3Q9Y5N1 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
HRH3Q9Y5N1 CA15P1-201ENST00000481698 905 ntBASIC17.23■□□□□ 0.35
HRH3Q9Y5N1 YBX1P2-201ENST00000489612 999 ntBASIC17.23■□□□□ 0.35
HRH3Q9Y5N1 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.23■□□□□ 0.35
HRH3Q9Y5N1 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HRH3Q9Y5N1 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.23■□□□□ 0.35
HRH3Q9Y5N1 AC011558.1-201ENST00000623459 338 ntBASIC17.23■□□□□ 0.35
HRH3Q9Y5N1 AC141257.4-201ENST00000634557 245 ntBASIC17.23■□□□□ 0.35
HRH3Q9Y5N1 AC136944.6-201ENST00000634818 245 ntBASIC17.23■□□□□ 0.35
HRH3Q9Y5N1 MYC-208ENST00000641036 567 ntBASIC17.23■□□□□ 0.35
HRH3Q9Y5N1 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HRH3Q9Y5N1 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
HRH3Q9Y5N1 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.23■□□□□ 0.35
HRH3Q9Y5N1 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
HRH3Q9Y5N1 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
HRH3Q9Y5N1 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
HRH3Q9Y5N1 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HRH3Q9Y5N1 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.23■□□□□ 0.35
HRH3Q9Y5N1 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HRH3Q9Y5N1 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HRH3Q9Y5N1 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.22■□□□□ 0.35
HRH3Q9Y5N1 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
HRH3Q9Y5N1 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
HRH3Q9Y5N1 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HRH3Q9Y5N1 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HRH3Q9Y5N1 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HRH3Q9Y5N1 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.22■□□□□ 0.35
HRH3Q9Y5N1 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.22■□□□□ 0.35
HRH3Q9Y5N1 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HRH3Q9Y5N1 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
HRH3Q9Y5N1 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HRH3Q9Y5N1 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HRH3Q9Y5N1 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
HRH3Q9Y5N1 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
HRH3Q9Y5N1 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
HRH3Q9Y5N1 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HRH3Q9Y5N1 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
HRH3Q9Y5N1 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HRH3Q9Y5N1 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HRH3Q9Y5N1 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HRH3Q9Y5N1 RNF152P1-201ENST00000397754 604 ntBASIC17.22■□□□□ 0.35
HRH3Q9Y5N1 FAM8A6P-201ENST00000407496 1135 ntBASIC17.22■□□□□ 0.35
HRH3Q9Y5N1 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HRH3Q9Y5N1 TSPY5P-201ENST00000426936 936 ntBASIC17.22■□□□□ 0.35
HRH3Q9Y5N1 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.22■□□□□ 0.35
HRH3Q9Y5N1 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HRH3Q9Y5N1 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
HRH3Q9Y5N1 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HRH3Q9Y5N1 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.22■□□□□ 0.35
HRH3Q9Y5N1 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
HRH3Q9Y5N1 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HRH3Q9Y5N1 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.22■□□□□ 0.35
HRH3Q9Y5N1 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.22■□□□□ 0.35
HRH3Q9Y5N1 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HRH3Q9Y5N1 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HRH3Q9Y5N1 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HRH3Q9Y5N1 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HRH3Q9Y5N1 KRT8P45-201ENST00000414328 1447 ntBASIC17.21■□□□□ 0.35
HRH3Q9Y5N1 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HRH3Q9Y5N1 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HRH3Q9Y5N1 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.21■□□□□ 0.35
HRH3Q9Y5N1 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HRH3Q9Y5N1 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HRH3Q9Y5N1 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.21■□□□□ 0.35
HRH3Q9Y5N1 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.21■□□□□ 0.35
HRH3Q9Y5N1 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HRH3Q9Y5N1 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HRH3Q9Y5N1 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HRH3Q9Y5N1 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.21■□□□□ 0.35
HRH3Q9Y5N1 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.21■□□□□ 0.35
HRH3Q9Y5N1 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HRH3Q9Y5N1 AL031133.1-201ENST00000406807 723 ntBASIC17.21■□□□□ 0.35
HRH3Q9Y5N1 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.21■□□□□ 0.35
HRH3Q9Y5N1 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
HRH3Q9Y5N1 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.21■□□□□ 0.35
HRH3Q9Y5N1 TSPY17P-201ENST00000450329 467 ntBASIC17.21■□□□□ 0.35
HRH3Q9Y5N1 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.21■□□□□ 0.35
HRH3Q9Y5N1 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms