Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHB2Q9Y5E7 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHB2Q9Y5E7 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
PCDHB2Q9Y5E7 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHB2Q9Y5E7 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
PCDHB2Q9Y5E7 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
PCDHB2Q9Y5E7 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHB2Q9Y5E7 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHB2Q9Y5E7 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.43■□□□□ 0.86
PCDHB2Q9Y5E7 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHB2Q9Y5E7 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.43■□□□□ 0.86
PCDHB2Q9Y5E7 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHB2Q9Y5E7 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHB2Q9Y5E7 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHB2Q9Y5E7 AL512353.2-201ENST00000448759 1962 ntBASIC20.43■□□□□ 0.86
PCDHB2Q9Y5E7 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHB2Q9Y5E7 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHB2Q9Y5E7 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHB2Q9Y5E7 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
PCDHB2Q9Y5E7 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHB2Q9Y5E7 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHB2Q9Y5E7 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHB2Q9Y5E7 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
PCDHB2Q9Y5E7 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHB2Q9Y5E7 AC034232.1-201ENST00000506026 1064 ntBASIC20.43■□□□□ 0.86
PCDHB2Q9Y5E7 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.43■□□□□ 0.86
PCDHB2Q9Y5E7 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.43■□□□□ 0.86
PCDHB2Q9Y5E7 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHB2Q9Y5E7 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHB2Q9Y5E7 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHB2Q9Y5E7 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
PCDHB2Q9Y5E7 RCC2P3-201ENST00000418112 1537 ntBASIC20.43■□□□□ 0.86
PCDHB2Q9Y5E7 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHB2Q9Y5E7 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHB2Q9Y5E7 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.42■□□□□ 0.86
PCDHB2Q9Y5E7 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHB2Q9Y5E7 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHB2Q9Y5E7 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHB2Q9Y5E7 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHB2Q9Y5E7 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHB2Q9Y5E7 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC20.42■□□□□ 0.86
PCDHB2Q9Y5E7 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC20.42■□□□□ 0.86
PCDHB2Q9Y5E7 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHB2Q9Y5E7 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.42■□□□□ 0.86
PCDHB2Q9Y5E7 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHB2Q9Y5E7 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC20.42■□□□□ 0.86
PCDHB2Q9Y5E7 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHB2Q9Y5E7 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHB2Q9Y5E7 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHB2Q9Y5E7 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHB2Q9Y5E7 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHB2Q9Y5E7 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHB2Q9Y5E7 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.42■□□□□ 0.86
PCDHB2Q9Y5E7 AL109659.2-201ENST00000606809 1674 ntBASIC20.42■□□□□ 0.86
PCDHB2Q9Y5E7 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHB2Q9Y5E7 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
PCDHB2Q9Y5E7 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHB2Q9Y5E7 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
PCDHB2Q9Y5E7 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
PCDHB2Q9Y5E7 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHB2Q9Y5E7 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHB2Q9Y5E7 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHB2Q9Y5E7 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
PCDHB2Q9Y5E7 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHB2Q9Y5E7 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.41■□□□□ 0.86
PCDHB2Q9Y5E7 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
PCDHB2Q9Y5E7 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC20.41■□□□□ 0.86
PCDHB2Q9Y5E7 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.41■□□□□ 0.86
PCDHB2Q9Y5E7 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHB2Q9Y5E7 METTL23-204ENST00000586752 904 ntTSL 2 BASIC20.41■□□□□ 0.86
PCDHB2Q9Y5E7 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHB2Q9Y5E7 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHB2Q9Y5E7 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHB2Q9Y5E7 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHB2Q9Y5E7 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHB2Q9Y5E7 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHB2Q9Y5E7 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.41■□□□□ 0.86
PCDHB2Q9Y5E7 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHB2Q9Y5E7 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHB2Q9Y5E7 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.41■□□□□ 0.86
PCDHB2Q9Y5E7 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHB2Q9Y5E7 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHB2Q9Y5E7 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.41■□□□□ 0.86
PCDHB2Q9Y5E7 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHB2Q9Y5E7 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHB2Q9Y5E7 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
PCDHB2Q9Y5E7 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHB2Q9Y5E7 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHB2Q9Y5E7 HBZP1-201ENST00000354915 429 ntBASIC20.4■□□□□ 0.86
PCDHB2Q9Y5E7 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHB2Q9Y5E7 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHB2Q9Y5E7 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
PCDHB2Q9Y5E7 FXN-203ENST00000396366 922 ntTSL 2 BASIC20.4■□□□□ 0.86
PCDHB2Q9Y5E7 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.4■□□□□ 0.86
PCDHB2Q9Y5E7 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC20.4■□□□□ 0.86
PCDHB2Q9Y5E7 AC092597.1-201ENST00000487352 616 ntBASIC20.4■□□□□ 0.86
PCDHB2Q9Y5E7 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
PCDHB2Q9Y5E7 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHB2Q9Y5E7 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHB2Q9Y5E7 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms