Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MRPS28Q9Y2Q9 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.11■□□□□ 0.17
MRPS28Q9Y2Q9 MTMR9LP-203ENST00000426597 1545 ntBASIC16.11■□□□□ 0.17
MRPS28Q9Y2Q9 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
MRPS28Q9Y2Q9 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MRPS28Q9Y2Q9 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MRPS28Q9Y2Q9 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC16.11■□□□□ 0.17
MRPS28Q9Y2Q9 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MRPS28Q9Y2Q9 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MRPS28Q9Y2Q9 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MRPS28Q9Y2Q9 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
MRPS28Q9Y2Q9 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC16.11■□□□□ 0.17
MRPS28Q9Y2Q9 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.11■□□□□ 0.17
MRPS28Q9Y2Q9 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MRPS28Q9Y2Q9 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC16.11■□□□□ 0.17
MRPS28Q9Y2Q9 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MRPS28Q9Y2Q9 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.11■□□□□ 0.17
MRPS28Q9Y2Q9 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.11■□□□□ 0.17
MRPS28Q9Y2Q9 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
MRPS28Q9Y2Q9 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MRPS28Q9Y2Q9 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MRPS28Q9Y2Q9 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MRPS28Q9Y2Q9 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MRPS28Q9Y2Q9 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
MRPS28Q9Y2Q9 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MRPS28Q9Y2Q9 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.11■□□□□ 0.17
MRPS28Q9Y2Q9 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MRPS28Q9Y2Q9 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.11■□□□□ 0.17
MRPS28Q9Y2Q9 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
MRPS28Q9Y2Q9 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MRPS28Q9Y2Q9 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MRPS28Q9Y2Q9 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.1■□□□□ 0.17
MRPS28Q9Y2Q9 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
MRPS28Q9Y2Q9 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
MRPS28Q9Y2Q9 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MRPS28Q9Y2Q9 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MRPS28Q9Y2Q9 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.1■□□□□ 0.17
MRPS28Q9Y2Q9 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.1■□□□□ 0.17
MRPS28Q9Y2Q9 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.1■□□□□ 0.17
MRPS28Q9Y2Q9 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.1■□□□□ 0.17
MRPS28Q9Y2Q9 AC068587.9-201ENST00000641814 219 ntBASIC16.1■□□□□ 0.17
MRPS28Q9Y2Q9 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MRPS28Q9Y2Q9 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.1■□□□□ 0.17
MRPS28Q9Y2Q9 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.1■□□□□ 0.17
MRPS28Q9Y2Q9 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
MRPS28Q9Y2Q9 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MRPS28Q9Y2Q9 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MRPS28Q9Y2Q9 AL499627.1-201ENST00000569373 2188 ntBASIC16.1■□□□□ 0.17
MRPS28Q9Y2Q9 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MRPS28Q9Y2Q9 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MRPS28Q9Y2Q9 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MRPS28Q9Y2Q9 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MRPS28Q9Y2Q9 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
MRPS28Q9Y2Q9 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC16.1■□□□□ 0.17
MRPS28Q9Y2Q9 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
MRPS28Q9Y2Q9 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.09■□□□□ 0.17
MRPS28Q9Y2Q9 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MRPS28Q9Y2Q9 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MRPS28Q9Y2Q9 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.09■□□□□ 0.17
MRPS28Q9Y2Q9 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.09■□□□□ 0.17
MRPS28Q9Y2Q9 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
MRPS28Q9Y2Q9 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
MRPS28Q9Y2Q9 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
MRPS28Q9Y2Q9 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
MRPS28Q9Y2Q9 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
MRPS28Q9Y2Q9 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MRPS28Q9Y2Q9 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.09■□□□□ 0.17
MRPS28Q9Y2Q9 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC16.09■□□□□ 0.17
MRPS28Q9Y2Q9 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MRPS28Q9Y2Q9 Z85996.1-201ENST00000494644 937 ntBASIC16.09■□□□□ 0.17
MRPS28Q9Y2Q9 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
MRPS28Q9Y2Q9 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
MRPS28Q9Y2Q9 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC16.09■□□□□ 0.17
MRPS28Q9Y2Q9 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MRPS28Q9Y2Q9 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MRPS28Q9Y2Q9 AC142086.2-201ENST00000569753 217 ntBASIC16.09■□□□□ 0.17
MRPS28Q9Y2Q9 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC16.09■□□□□ 0.17
MRPS28Q9Y2Q9 MYC-208ENST00000641036 567 ntBASIC16.09■□□□□ 0.17
MRPS28Q9Y2Q9 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
MRPS28Q9Y2Q9 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.09■□□□□ 0.17
MRPS28Q9Y2Q9 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.09■□□□□ 0.17
MRPS28Q9Y2Q9 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MRPS28Q9Y2Q9 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.09■□□□□ 0.17
MRPS28Q9Y2Q9 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.09■□□□□ 0.17
MRPS28Q9Y2Q9 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MRPS28Q9Y2Q9 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
MRPS28Q9Y2Q9 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MRPS28Q9Y2Q9 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
MRPS28Q9Y2Q9 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.08■□□□□ 0.17
MRPS28Q9Y2Q9 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
MRPS28Q9Y2Q9 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
MRPS28Q9Y2Q9 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MRPS28Q9Y2Q9 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MRPS28Q9Y2Q9 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.08■□□□□ 0.16
MRPS28Q9Y2Q9 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
MRPS28Q9Y2Q9 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
MRPS28Q9Y2Q9 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.08■□□□□ 0.16
MRPS28Q9Y2Q9 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.08■□□□□ 0.16
MRPS28Q9Y2Q9 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MRPS28Q9Y2Q9 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms