Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.87■□□□□ 0.77
SALL4Q9UJQ4 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SALL4Q9UJQ4 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.87■□□□□ 0.77
SALL4Q9UJQ4 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.87■□□□□ 0.77
SALL4Q9UJQ4 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.87■□□□□ 0.77
SALL4Q9UJQ4 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SALL4Q9UJQ4 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
SALL4Q9UJQ4 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SALL4Q9UJQ4 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SALL4Q9UJQ4 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.87■□□□□ 0.77
SALL4Q9UJQ4 KRASP1-201ENST00000407852 552 ntBASIC19.87■□□□□ 0.77
SALL4Q9UJQ4 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SALL4Q9UJQ4 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
SALL4Q9UJQ4 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.87■□□□□ 0.77
SALL4Q9UJQ4 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.87■□□□□ 0.77
SALL4Q9UJQ4 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SALL4Q9UJQ4 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SALL4Q9UJQ4 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SALL4Q9UJQ4 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SALL4Q9UJQ4 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.87■□□□□ 0.77
SALL4Q9UJQ4 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SALL4Q9UJQ4 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SALL4Q9UJQ4 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SALL4Q9UJQ4 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SALL4Q9UJQ4 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SALL4Q9UJQ4 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
SALL4Q9UJQ4 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SALL4Q9UJQ4 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SALL4Q9UJQ4 KRT8P3-201ENST00000519669 1449 ntBASIC19.86■□□□□ 0.77
SALL4Q9UJQ4 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.86■□□□□ 0.77
SALL4Q9UJQ4 AC093677.2-201ENST00000600169 1863 ntBASIC19.86■□□□□ 0.77
SALL4Q9UJQ4 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
SALL4Q9UJQ4 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
SALL4Q9UJQ4 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SALL4Q9UJQ4 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SALL4Q9UJQ4 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
SALL4Q9UJQ4 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SALL4Q9UJQ4 AC004980.1-204ENST00000429707 299 ntBASIC19.86■□□□□ 0.77
SALL4Q9UJQ4 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.86■□□□□ 0.77
SALL4Q9UJQ4 KRT16P5-201ENST00000455284 522 ntBASIC19.86■□□□□ 0.77
SALL4Q9UJQ4 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SALL4Q9UJQ4 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
SALL4Q9UJQ4 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SALL4Q9UJQ4 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.86■□□□□ 0.77
SALL4Q9UJQ4 AC020763.4-201ENST00000623414 4170 ntBASIC19.86■□□□□ 0.77
SALL4Q9UJQ4 ESPNP-201ENST00000270691 2015 ntBASIC19.86■□□□□ 0.77
SALL4Q9UJQ4 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.86■□□□□ 0.77
SALL4Q9UJQ4 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SALL4Q9UJQ4 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SALL4Q9UJQ4 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SALL4Q9UJQ4 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
SALL4Q9UJQ4 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
SALL4Q9UJQ4 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SALL4Q9UJQ4 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
SALL4Q9UJQ4 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.86■□□□□ 0.77
SALL4Q9UJQ4 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
SALL4Q9UJQ4 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SALL4Q9UJQ4 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SALL4Q9UJQ4 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.85■□□□□ 0.77
SALL4Q9UJQ4 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SALL4Q9UJQ4 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.85■□□□□ 0.77
SALL4Q9UJQ4 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SALL4Q9UJQ4 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
SALL4Q9UJQ4 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SALL4Q9UJQ4 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SALL4Q9UJQ4 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.85■□□□□ 0.77
SALL4Q9UJQ4 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SALL4Q9UJQ4 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.85■□□□□ 0.77
SALL4Q9UJQ4 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
SALL4Q9UJQ4 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.85■□□□□ 0.77
SALL4Q9UJQ4 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.85■□□□□ 0.77
SALL4Q9UJQ4 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.85■□□□□ 0.77
SALL4Q9UJQ4 MIR4497-201ENST00000583208 89 ntBASIC19.85■□□□□ 0.77
SALL4Q9UJQ4 AL445675.2-201ENST00000620291 557 ntBASIC19.85■□□□□ 0.77
SALL4Q9UJQ4 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.85■□□□□ 0.77
SALL4Q9UJQ4 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.85■□□□□ 0.77
SALL4Q9UJQ4 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.85■□□□□ 0.77
SALL4Q9UJQ4 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.85■□□□□ 0.77
SALL4Q9UJQ4 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SALL4Q9UJQ4 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.85■□□□□ 0.77
SALL4Q9UJQ4 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.85■□□□□ 0.77
SALL4Q9UJQ4 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SALL4Q9UJQ4 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.84■□□□□ 0.77
SALL4Q9UJQ4 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SALL4Q9UJQ4 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SALL4Q9UJQ4 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SALL4Q9UJQ4 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SALL4Q9UJQ4 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SALL4Q9UJQ4 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
SALL4Q9UJQ4 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SALL4Q9UJQ4 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.84■□□□□ 0.77
SALL4Q9UJQ4 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
SALL4Q9UJQ4 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SALL4Q9UJQ4 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SALL4Q9UJQ4 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.84■□□□□ 0.77
SALL4Q9UJQ4 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.84■□□□□ 0.77
SALL4Q9UJQ4 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.84■□□□□ 0.77
SALL4Q9UJQ4 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.84■□□□□ 0.77
SALL4Q9UJQ4 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.84■□□□□ 0.77
SALL4Q9UJQ4 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms