Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHRNA9Q9UGM1 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CHRNA9Q9UGM1 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.05■□□□□ 0.32
CHRNA9Q9UGM1 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHRNA9Q9UGM1 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHRNA9Q9UGM1 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CHRNA9Q9UGM1 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHRNA9Q9UGM1 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHRNA9Q9UGM1 AL390955.1-201ENST00000428694 934 ntBASIC17.05■□□□□ 0.32
CHRNA9Q9UGM1 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.05■□□□□ 0.32
CHRNA9Q9UGM1 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.05■□□□□ 0.32
CHRNA9Q9UGM1 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHRNA9Q9UGM1 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.05■□□□□ 0.32
CHRNA9Q9UGM1 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.05■□□□□ 0.32
CHRNA9Q9UGM1 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CHRNA9Q9UGM1 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.05■□□□□ 0.32
CHRNA9Q9UGM1 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHRNA9Q9UGM1 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CHRNA9Q9UGM1 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CHRNA9Q9UGM1 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CHRNA9Q9UGM1 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CHRNA9Q9UGM1 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CHRNA9Q9UGM1 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHRNA9Q9UGM1 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.04■□□□□ 0.32
CHRNA9Q9UGM1 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHRNA9Q9UGM1 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHRNA9Q9UGM1 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.04■□□□□ 0.32
CHRNA9Q9UGM1 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHRNA9Q9UGM1 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.04■□□□□ 0.32
CHRNA9Q9UGM1 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.04■□□□□ 0.32
CHRNA9Q9UGM1 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHRNA9Q9UGM1 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CHRNA9Q9UGM1 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.04■□□□□ 0.32
CHRNA9Q9UGM1 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.04■□□□□ 0.32
CHRNA9Q9UGM1 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHRNA9Q9UGM1 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.04■□□□□ 0.32
CHRNA9Q9UGM1 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHRNA9Q9UGM1 KRT8P32-201ENST00000512863 1461 ntBASIC17.04■□□□□ 0.32
CHRNA9Q9UGM1 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
CHRNA9Q9UGM1 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHRNA9Q9UGM1 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.04■□□□□ 0.32
CHRNA9Q9UGM1 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHRNA9Q9UGM1 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.04■□□□□ 0.32
CHRNA9Q9UGM1 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CHRNA9Q9UGM1 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHRNA9Q9UGM1 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.03■□□□□ 0.32
CHRNA9Q9UGM1 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHRNA9Q9UGM1 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CHRNA9Q9UGM1 AC007613.1-201ENST00000572811 2597 ntBASIC17.03■□□□□ 0.32
CHRNA9Q9UGM1 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.03■□□□□ 0.32
CHRNA9Q9UGM1 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.03■□□□□ 0.32
CHRNA9Q9UGM1 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHRNA9Q9UGM1 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.03■□□□□ 0.32
CHRNA9Q9UGM1 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHRNA9Q9UGM1 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.03■□□□□ 0.32
CHRNA9Q9UGM1 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHRNA9Q9UGM1 BICD1-207ENST00000551848 1962 ntBASIC17.03■□□□□ 0.32
CHRNA9Q9UGM1 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHRNA9Q9UGM1 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.03■□□□□ 0.32
CHRNA9Q9UGM1 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.03■□□□□ 0.32
CHRNA9Q9UGM1 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.03■□□□□ 0.32
CHRNA9Q9UGM1 SLC25A1P2-201ENST00000430693 912 ntBASIC17.03■□□□□ 0.32
CHRNA9Q9UGM1 TSPY15P-201ENST00000457163 923 ntBASIC17.03■□□□□ 0.32
CHRNA9Q9UGM1 C2orf69P3-201ENST00000565542 1120 ntBASIC17.03■□□□□ 0.32
CHRNA9Q9UGM1 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHRNA9Q9UGM1 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHRNA9Q9UGM1 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHRNA9Q9UGM1 HEIH-201ENST00000623091 1652 ntBASIC17.03■□□□□ 0.32
CHRNA9Q9UGM1 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHRNA9Q9UGM1 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.03■□□□□ 0.32
CHRNA9Q9UGM1 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHRNA9Q9UGM1 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHRNA9Q9UGM1 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHRNA9Q9UGM1 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CHRNA9Q9UGM1 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHRNA9Q9UGM1 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHRNA9Q9UGM1 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.02■□□□□ 0.32
CHRNA9Q9UGM1 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.02■□□□□ 0.32
CHRNA9Q9UGM1 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CHRNA9Q9UGM1 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.02■□□□□ 0.32
CHRNA9Q9UGM1 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.02■□□□□ 0.32
CHRNA9Q9UGM1 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHRNA9Q9UGM1 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHRNA9Q9UGM1 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.02■□□□□ 0.32
CHRNA9Q9UGM1 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
CHRNA9Q9UGM1 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.02■□□□□ 0.32
CHRNA9Q9UGM1 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHRNA9Q9UGM1 AL390961.4-201ENST00000623958 2535 ntBASIC17.02■□□□□ 0.32
CHRNA9Q9UGM1 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.02■□□□□ 0.32
CHRNA9Q9UGM1 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHRNA9Q9UGM1 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.02■□□□□ 0.32
CHRNA9Q9UGM1 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.02■□□□□ 0.32
CHRNA9Q9UGM1 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CHRNA9Q9UGM1 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHRNA9Q9UGM1 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.02■□□□□ 0.32
CHRNA9Q9UGM1 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.02■□□□□ 0.32
CHRNA9Q9UGM1 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.02■□□□□ 0.32
CHRNA9Q9UGM1 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHRNA9Q9UGM1 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CHRNA9Q9UGM1 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms