Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 MCCD1P1-208ENST00000445732 328 ntBASIC17.33■□□□□ 0.36
HPF1Q9NWY4 AC092647.4-201ENST00000457211 535 ntBASIC17.33■□□□□ 0.36
HPF1Q9NWY4 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.33■□□□□ 0.36
HPF1Q9NWY4 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.33■□□□□ 0.36
HPF1Q9NWY4 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HPF1Q9NWY4 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
HPF1Q9NWY4 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HPF1Q9NWY4 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.33■□□□□ 0.36
HPF1Q9NWY4 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
HPF1Q9NWY4 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HPF1Q9NWY4 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
HPF1Q9NWY4 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HPF1Q9NWY4 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HPF1Q9NWY4 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
HPF1Q9NWY4 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HPF1Q9NWY4 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HPF1Q9NWY4 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HPF1Q9NWY4 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.32■□□□□ 0.36
HPF1Q9NWY4 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.32■□□□□ 0.36
HPF1Q9NWY4 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
HPF1Q9NWY4 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
HPF1Q9NWY4 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HPF1Q9NWY4 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HPF1Q9NWY4 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
HPF1Q9NWY4 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HPF1Q9NWY4 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
HPF1Q9NWY4 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
HPF1Q9NWY4 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.32■□□□□ 0.36
HPF1Q9NWY4 FP475955.4-201ENST00000623131 1990 ntBASIC17.32■□□□□ 0.36
HPF1Q9NWY4 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
HPF1Q9NWY4 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.32■□□□□ 0.36
HPF1Q9NWY4 AL023284.2-201ENST00000405850 579 ntBASIC17.32■□□□□ 0.36
HPF1Q9NWY4 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
HPF1Q9NWY4 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.32■□□□□ 0.36
HPF1Q9NWY4 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HPF1Q9NWY4 CR769767.2-201ENST00000622735 460 ntBASIC17.32■□□□□ 0.36
HPF1Q9NWY4 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HPF1Q9NWY4 AL023973.1-201ENST00000624619 620 ntBASIC17.32■□□□□ 0.36
HPF1Q9NWY4 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
HPF1Q9NWY4 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HPF1Q9NWY4 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.32■□□□□ 0.36
HPF1Q9NWY4 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.32■□□□□ 0.36
HPF1Q9NWY4 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HPF1Q9NWY4 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
HPF1Q9NWY4 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HPF1Q9NWY4 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
HPF1Q9NWY4 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HPF1Q9NWY4 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
HPF1Q9NWY4 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HPF1Q9NWY4 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.32■□□□□ 0.36
HPF1Q9NWY4 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HPF1Q9NWY4 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.31■□□□□ 0.36
HPF1Q9NWY4 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HPF1Q9NWY4 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HPF1Q9NWY4 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HPF1Q9NWY4 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
HPF1Q9NWY4 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HPF1Q9NWY4 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.31■□□□□ 0.36
HPF1Q9NWY4 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HPF1Q9NWY4 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
HPF1Q9NWY4 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
HPF1Q9NWY4 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HPF1Q9NWY4 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HPF1Q9NWY4 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HPF1Q9NWY4 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HPF1Q9NWY4 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
HPF1Q9NWY4 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HPF1Q9NWY4 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HPF1Q9NWY4 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
HPF1Q9NWY4 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
HPF1Q9NWY4 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.31■□□□□ 0.36
HPF1Q9NWY4 TSPY5P-201ENST00000426936 936 ntBASIC17.31■□□□□ 0.36
HPF1Q9NWY4 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.31■□□□□ 0.36
HPF1Q9NWY4 AC022616.7-201ENST00000525383 220 ntBASIC17.31■□□□□ 0.36
HPF1Q9NWY4 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.31■□□□□ 0.36
HPF1Q9NWY4 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HPF1Q9NWY4 WWOX-216ENST00000569818 525 ntBASIC17.31■□□□□ 0.36
HPF1Q9NWY4 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.31■□□□□ 0.36
HPF1Q9NWY4 NEK4P2-201ENST00000580004 1012 ntBASIC17.31■□□□□ 0.36
HPF1Q9NWY4 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.31■□□□□ 0.36
HPF1Q9NWY4 NTF6B-201ENST00000591913 560 ntBASIC17.31■□□□□ 0.36
HPF1Q9NWY4 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
HPF1Q9NWY4 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HPF1Q9NWY4 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HPF1Q9NWY4 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HPF1Q9NWY4 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HPF1Q9NWY4 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
HPF1Q9NWY4 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HPF1Q9NWY4 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
HPF1Q9NWY4 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.3■□□□□ 0.36
HPF1Q9NWY4 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HPF1Q9NWY4 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HPF1Q9NWY4 AC120498.9-201ENST00000339021 3867 ntBASIC17.3■□□□□ 0.36
HPF1Q9NWY4 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.3■□□□□ 0.36
HPF1Q9NWY4 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.3■□□□□ 0.36
HPF1Q9NWY4 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HPF1Q9NWY4 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HPF1Q9NWY4 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.3■□□□□ 0.36
HPF1Q9NWY4 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HPF1Q9NWY4 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms