Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHB16Q9NRJ7 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB16Q9NRJ7 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC16.24■□□□□ 0.19
PCDHB16Q9NRJ7 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.24■□□□□ 0.19
PCDHB16Q9NRJ7 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB16Q9NRJ7 AL160286.2-201ENST00000567150 934 ntBASIC16.24■□□□□ 0.19
PCDHB16Q9NRJ7 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB16Q9NRJ7 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
PCDHB16Q9NRJ7 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB16Q9NRJ7 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.24■□□□□ 0.19
PCDHB16Q9NRJ7 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB16Q9NRJ7 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB16Q9NRJ7 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB16Q9NRJ7 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB16Q9NRJ7 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
PCDHB16Q9NRJ7 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHB16Q9NRJ7 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB16Q9NRJ7 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB16Q9NRJ7 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PCDHB16Q9NRJ7 AC124067.4-201ENST00000519691 2379 ntBASIC16.23■□□□□ 0.19
PCDHB16Q9NRJ7 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
PCDHB16Q9NRJ7 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PCDHB16Q9NRJ7 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PCDHB16Q9NRJ7 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB16Q9NRJ7 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB16Q9NRJ7 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB16Q9NRJ7 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
PCDHB16Q9NRJ7 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB16Q9NRJ7 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB16Q9NRJ7 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB16Q9NRJ7 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB16Q9NRJ7 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB16Q9NRJ7 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB16Q9NRJ7 POM121L13P-201ENST00000422362 380 ntBASIC16.23■□□□□ 0.19
PCDHB16Q9NRJ7 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC16.23■□□□□ 0.19
PCDHB16Q9NRJ7 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.23■□□□□ 0.19
PCDHB16Q9NRJ7 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB16Q9NRJ7 AC083906.6-201ENST00000641366 219 ntBASIC16.23■□□□□ 0.19
PCDHB16Q9NRJ7 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHB16Q9NRJ7 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.23■□□□□ 0.19
PCDHB16Q9NRJ7 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
PCDHB16Q9NRJ7 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB16Q9NRJ7 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHB16Q9NRJ7 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB16Q9NRJ7 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHB16Q9NRJ7 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHB16Q9NRJ7 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDHB16Q9NRJ7 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHB16Q9NRJ7 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHB16Q9NRJ7 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHB16Q9NRJ7 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHB16Q9NRJ7 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHB16Q9NRJ7 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHB16Q9NRJ7 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDHB16Q9NRJ7 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHB16Q9NRJ7 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHB16Q9NRJ7 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
PCDHB16Q9NRJ7 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
PCDHB16Q9NRJ7 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHB16Q9NRJ7 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.22■□□□□ 0.19
PCDHB16Q9NRJ7 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHB16Q9NRJ7 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHB16Q9NRJ7 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHB16Q9NRJ7 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHB16Q9NRJ7 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.22■□□□□ 0.19
PCDHB16Q9NRJ7 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHB16Q9NRJ7 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
PCDHB16Q9NRJ7 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHB16Q9NRJ7 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHB16Q9NRJ7 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC16.22■□□□□ 0.19
PCDHB16Q9NRJ7 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDHB16Q9NRJ7 AC083880.1-201ENST00000608266 535 ntBASIC16.22■□□□□ 0.19
PCDHB16Q9NRJ7 INO80E-214ENST00000620599 515 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDHB16Q9NRJ7 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHB16Q9NRJ7 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHB16Q9NRJ7 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHB16Q9NRJ7 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHB16Q9NRJ7 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDHB16Q9NRJ7 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHB16Q9NRJ7 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDHB16Q9NRJ7 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHB16Q9NRJ7 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDHB16Q9NRJ7 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHB16Q9NRJ7 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDHB16Q9NRJ7 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHB16Q9NRJ7 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDHB16Q9NRJ7 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHB16Q9NRJ7 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
PCDHB16Q9NRJ7 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDHB16Q9NRJ7 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDHB16Q9NRJ7 AC090164.3-201ENST00000610780 2143 ntBASIC16.21■□□□□ 0.19
PCDHB16Q9NRJ7 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
PCDHB16Q9NRJ7 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHB16Q9NRJ7 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDHB16Q9NRJ7 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
PCDHB16Q9NRJ7 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHB16Q9NRJ7 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHB16Q9NRJ7 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHB16Q9NRJ7 APTR-205ENST00000447009 902 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDHB16Q9NRJ7 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms