Protein–RNA interactions for Protein: Q9NRG0

CHRAC1, Chromatin accessibility complex protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRAC1Q9NRG0 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
CHRAC1Q9NRG0 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHRAC1Q9NRG0 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHRAC1Q9NRG0 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.83■□□□□ 0.6
CHRAC1Q9NRG0 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHRAC1Q9NRG0 AC008556.1-201ENST00000610908 2040 ntBASIC18.83■□□□□ 0.6
CHRAC1Q9NRG0 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHRAC1Q9NRG0 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHRAC1Q9NRG0 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.82■□□□□ 0.6
CHRAC1Q9NRG0 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
CHRAC1Q9NRG0 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHRAC1Q9NRG0 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CHRAC1Q9NRG0 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHRAC1Q9NRG0 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.82■□□□□ 0.6
CHRAC1Q9NRG0 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.82■□□□□ 0.6
CHRAC1Q9NRG0 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.82■□□□□ 0.6
CHRAC1Q9NRG0 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.82■□□□□ 0.6
CHRAC1Q9NRG0 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.82■□□□□ 0.6
CHRAC1Q9NRG0 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.82■□□□□ 0.6
CHRAC1Q9NRG0 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.82■□□□□ 0.6
CHRAC1Q9NRG0 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.82■□□□□ 0.6
CHRAC1Q9NRG0 AC026471.5-201ENST00000615068 467 ntBASIC18.82■□□□□ 0.6
CHRAC1Q9NRG0 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
CHRAC1Q9NRG0 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHRAC1Q9NRG0 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.82■□□□□ 0.6
CHRAC1Q9NRG0 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.82■□□□□ 0.6
CHRAC1Q9NRG0 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHRAC1Q9NRG0 AL390961.4-201ENST00000623958 2535 ntBASIC18.82■□□□□ 0.6
CHRAC1Q9NRG0 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CHRAC1Q9NRG0 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.82■□□□□ 0.6
CHRAC1Q9NRG0 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.82■□□□□ 0.6
CHRAC1Q9NRG0 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.82■□□□□ 0.6
CHRAC1Q9NRG0 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHRAC1Q9NRG0 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHRAC1Q9NRG0 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.82■□□□□ 0.6
CHRAC1Q9NRG0 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
CHRAC1Q9NRG0 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHRAC1Q9NRG0 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHRAC1Q9NRG0 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHRAC1Q9NRG0 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHRAC1Q9NRG0 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CHRAC1Q9NRG0 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CHRAC1Q9NRG0 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
CHRAC1Q9NRG0 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CHRAC1Q9NRG0 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.81■□□□□ 0.6
CHRAC1Q9NRG0 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.81■□□□□ 0.6
CHRAC1Q9NRG0 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHRAC1Q9NRG0 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.81■□□□□ 0.6
CHRAC1Q9NRG0 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.81■□□□□ 0.6
CHRAC1Q9NRG0 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.81■□□□□ 0.6
CHRAC1Q9NRG0 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.81■□□□□ 0.6
CHRAC1Q9NRG0 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHRAC1Q9NRG0 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
CHRAC1Q9NRG0 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHRAC1Q9NRG0 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
CHRAC1Q9NRG0 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHRAC1Q9NRG0 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.81■□□□□ 0.6
CHRAC1Q9NRG0 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHRAC1Q9NRG0 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.81■□□□□ 0.6
CHRAC1Q9NRG0 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHRAC1Q9NRG0 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CHRAC1Q9NRG0 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.8■□□□□ 0.6
CHRAC1Q9NRG0 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHRAC1Q9NRG0 AL109659.2-201ENST00000606809 1674 ntBASIC18.8■□□□□ 0.6
CHRAC1Q9NRG0 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHRAC1Q9NRG0 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
CHRAC1Q9NRG0 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHRAC1Q9NRG0 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CHRAC1Q9NRG0 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.8■□□□□ 0.6
CHRAC1Q9NRG0 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.8■□□□□ 0.6
CHRAC1Q9NRG0 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CHRAC1Q9NRG0 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CHRAC1Q9NRG0 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
CHRAC1Q9NRG0 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.8■□□□□ 0.6
CHRAC1Q9NRG0 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.8■□□□□ 0.6
CHRAC1Q9NRG0 CRYGFP-201ENST00000418459 633 ntBASIC18.8■□□□□ 0.6
CHRAC1Q9NRG0 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.8■□□□□ 0.6
CHRAC1Q9NRG0 AC008550.1-201ENST00000511500 884 ntBASIC18.8■□□□□ 0.6
CHRAC1Q9NRG0 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.8■□□□□ 0.6
CHRAC1Q9NRG0 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.8■□□□□ 0.6
CHRAC1Q9NRG0 AP003071.4-201ENST00000562276 1284 ntBASIC18.8■□□□□ 0.6
CHRAC1Q9NRG0 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.8■□□□□ 0.6
CHRAC1Q9NRG0 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.8■□□□□ 0.6
CHRAC1Q9NRG0 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.8■□□□□ 0.6
CHRAC1Q9NRG0 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CHRAC1Q9NRG0 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHRAC1Q9NRG0 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.8■□□□□ 0.6
CHRAC1Q9NRG0 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHRAC1Q9NRG0 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHRAC1Q9NRG0 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHRAC1Q9NRG0 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CHRAC1Q9NRG0 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
CHRAC1Q9NRG0 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CHRAC1Q9NRG0 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHRAC1Q9NRG0 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.79■□□□□ 0.6
CHRAC1Q9NRG0 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHRAC1Q9NRG0 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CHRAC1Q9NRG0 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHRAC1Q9NRG0 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHRAC1Q9NRG0 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms