Protein–RNA interactions for Protein: Q9NPP4

NLRC4, NLR family CARD domain-containing protein 4, humanhuman

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4Q9NPP4 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NLRC4Q9NPP4 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.27■□□□□ 0.84
NLRC4Q9NPP4 RARRES2P10-201ENST00000564312 460 ntBASIC20.27■□□□□ 0.84
NLRC4Q9NPP4 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.27■□□□□ 0.84
NLRC4Q9NPP4 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.27■□□□□ 0.84
NLRC4Q9NPP4 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.27■□□□□ 0.84
NLRC4Q9NPP4 AC073195.1-201ENST00000607241 877 ntBASIC20.27■□□□□ 0.84
NLRC4Q9NPP4 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NLRC4Q9NPP4 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.27■□□□□ 0.84
NLRC4Q9NPP4 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NLRC4Q9NPP4 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NLRC4Q9NPP4 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NLRC4Q9NPP4 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.27■□□□□ 0.84
NLRC4Q9NPP4 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
NLRC4Q9NPP4 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.27■□□□□ 0.83
NLRC4Q9NPP4 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
NLRC4Q9NPP4 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.27■□□□□ 0.83
NLRC4Q9NPP4 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.27■□□□□ 0.83
NLRC4Q9NPP4 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.27■□□□□ 0.83
NLRC4Q9NPP4 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
NLRC4Q9NPP4 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NLRC4Q9NPP4 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.26■□□□□ 0.83
NLRC4Q9NPP4 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NLRC4Q9NPP4 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NLRC4Q9NPP4 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
NLRC4Q9NPP4 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NLRC4Q9NPP4 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NLRC4Q9NPP4 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NLRC4Q9NPP4 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NLRC4Q9NPP4 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.26■□□□□ 0.83
NLRC4Q9NPP4 TSPY20P-201ENST00000450910 630 ntBASIC20.26■□□□□ 0.83
NLRC4Q9NPP4 FAM201B-201ENST00000458407 597 ntBASIC20.26■□□□□ 0.83
NLRC4Q9NPP4 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.26■□□□□ 0.83
NLRC4Q9NPP4 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
NLRC4Q9NPP4 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.26■□□□□ 0.83
NLRC4Q9NPP4 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.26■□□□□ 0.83
NLRC4Q9NPP4 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.26■□□□□ 0.83
NLRC4Q9NPP4 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NLRC4Q9NPP4 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
NLRC4Q9NPP4 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NLRC4Q9NPP4 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NLRC4Q9NPP4 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
NLRC4Q9NPP4 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NLRC4Q9NPP4 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.26■□□□□ 0.83
NLRC4Q9NPP4 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20.26■□□□□ 0.83
NLRC4Q9NPP4 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NLRC4Q9NPP4 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NLRC4Q9NPP4 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NLRC4Q9NPP4 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NLRC4Q9NPP4 AL357033.4-201ENST00000617703 1807 ntBASIC20.25■□□□□ 0.83
NLRC4Q9NPP4 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NLRC4Q9NPP4 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.25■□□□□ 0.83
NLRC4Q9NPP4 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.25■□□□□ 0.83
NLRC4Q9NPP4 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NLRC4Q9NPP4 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NLRC4Q9NPP4 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NLRC4Q9NPP4 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NLRC4Q9NPP4 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NLRC4Q9NPP4 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NLRC4Q9NPP4 FAM207BP-201ENST00000447172 505 ntBASIC20.25■□□□□ 0.83
NLRC4Q9NPP4 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.25■□□□□ 0.83
NLRC4Q9NPP4 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.25■□□□□ 0.83
NLRC4Q9NPP4 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
NLRC4Q9NPP4 CKBP1-201ENST00000565489 1086 ntBASIC20.25■□□□□ 0.83
NLRC4Q9NPP4 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.25■□□□□ 0.83
NLRC4Q9NPP4 AC026271.3-201ENST00000571884 352 ntBASIC20.25■□□□□ 0.83
NLRC4Q9NPP4 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
NLRC4Q9NPP4 AC130371.2-201ENST00000619443 611 ntBASIC20.25■□□□□ 0.83
NLRC4Q9NPP4 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.25■□□□□ 0.83
NLRC4Q9NPP4 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NLRC4Q9NPP4 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
NLRC4Q9NPP4 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
NLRC4Q9NPP4 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.25■□□□□ 0.83
NLRC4Q9NPP4 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.25■□□□□ 0.83
NLRC4Q9NPP4 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.25■□□□□ 0.83
NLRC4Q9NPP4 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
NLRC4Q9NPP4 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NLRC4Q9NPP4 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NLRC4Q9NPP4 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NLRC4Q9NPP4 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NLRC4Q9NPP4 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NLRC4Q9NPP4 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NLRC4Q9NPP4 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
NLRC4Q9NPP4 AC026471.1-201ENST00000564629 3026 ntBASIC20.24■□□□□ 0.83
NLRC4Q9NPP4 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NLRC4Q9NPP4 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.24■□□□□ 0.83
NLRC4Q9NPP4 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
NLRC4Q9NPP4 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.24■□□□□ 0.83
NLRC4Q9NPP4 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NLRC4Q9NPP4 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NLRC4Q9NPP4 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.24■□□□□ 0.83
NLRC4Q9NPP4 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NLRC4Q9NPP4 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
NLRC4Q9NPP4 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NLRC4Q9NPP4 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
NLRC4Q9NPP4 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
NLRC4Q9NPP4 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
NLRC4Q9NPP4 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NLRC4Q9NPP4 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.24■□□□□ 0.83
NLRC4Q9NPP4 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms