Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AL732292.2-201ENST00000609649 430 ntBASIC20.89■□□□□ 0.93
VTA1Q9NP79 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VTA1Q9NP79 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.89■□□□□ 0.93
VTA1Q9NP79 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
VTA1Q9NP79 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VTA1Q9NP79 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.89■□□□□ 0.93
VTA1Q9NP79 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
VTA1Q9NP79 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VTA1Q9NP79 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
VTA1Q9NP79 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
VTA1Q9NP79 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.88■□□□□ 0.93
VTA1Q9NP79 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VTA1Q9NP79 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VTA1Q9NP79 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VTA1Q9NP79 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VTA1Q9NP79 AC104819.1-201ENST00000504587 486 ntBASIC20.88■□□□□ 0.93
VTA1Q9NP79 AC091304.2-201ENST00000564639 760 ntBASIC20.88■□□□□ 0.93
VTA1Q9NP79 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.88■□□□□ 0.93
VTA1Q9NP79 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC20.88■□□□□ 0.93
VTA1Q9NP79 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.88■□□□□ 0.93
VTA1Q9NP79 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.88■□□□□ 0.93
VTA1Q9NP79 HEIH-201ENST00000623091 1652 ntBASIC20.88■□□□□ 0.93
VTA1Q9NP79 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.88■□□□□ 0.93
VTA1Q9NP79 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
VTA1Q9NP79 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VTA1Q9NP79 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
VTA1Q9NP79 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VTA1Q9NP79 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VTA1Q9NP79 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VTA1Q9NP79 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.88■□□□□ 0.93
VTA1Q9NP79 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VTA1Q9NP79 KRT89P-201ENST00000620027 1478 ntBASIC20.88■□□□□ 0.93
VTA1Q9NP79 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VTA1Q9NP79 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VTA1Q9NP79 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
VTA1Q9NP79 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
VTA1Q9NP79 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VTA1Q9NP79 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VTA1Q9NP79 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
VTA1Q9NP79 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
VTA1Q9NP79 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC20.87■□□□□ 0.93
VTA1Q9NP79 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.87■□□□□ 0.93
VTA1Q9NP79 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VTA1Q9NP79 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VTA1Q9NP79 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
VTA1Q9NP79 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.87■□□□□ 0.93
VTA1Q9NP79 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.87■□□□□ 0.93
VTA1Q9NP79 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
VTA1Q9NP79 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VTA1Q9NP79 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
VTA1Q9NP79 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
VTA1Q9NP79 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
VTA1Q9NP79 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VTA1Q9NP79 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VTA1Q9NP79 KRT8P50-201ENST00000562022 1438 ntBASIC20.87■□□□□ 0.93
VTA1Q9NP79 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.87■□□□□ 0.93
VTA1Q9NP79 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
VTA1Q9NP79 AC233702.3-201ENST00000578656 1387 ntBASIC20.86■□□□□ 0.93
VTA1Q9NP79 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VTA1Q9NP79 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VTA1Q9NP79 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VTA1Q9NP79 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VTA1Q9NP79 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VTA1Q9NP79 KRT18P31-201ENST00000506277 1292 ntBASIC20.86■□□□□ 0.93
VTA1Q9NP79 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.86■□□□□ 0.93
VTA1Q9NP79 FOSL1P1-201ENST00000511041 816 ntBASIC20.86■□□□□ 0.93
VTA1Q9NP79 KRT18P41-201ENST00000518924 1277 ntBASIC20.86■□□□□ 0.93
VTA1Q9NP79 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.86■□□□□ 0.93
VTA1Q9NP79 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.86■□□□□ 0.93
VTA1Q9NP79 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VTA1Q9NP79 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC20.86■□□□□ 0.93
VTA1Q9NP79 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VTA1Q9NP79 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VTA1Q9NP79 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
VTA1Q9NP79 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VTA1Q9NP79 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VTA1Q9NP79 KRT8P10-201ENST00000450021 1447 ntBASIC20.86■□□□□ 0.93
VTA1Q9NP79 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VTA1Q9NP79 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
VTA1Q9NP79 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VTA1Q9NP79 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.86■□□□□ 0.93
VTA1Q9NP79 AL357033.4-201ENST00000617703 1807 ntBASIC20.85■□□□□ 0.93
VTA1Q9NP79 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
VTA1Q9NP79 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
VTA1Q9NP79 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
VTA1Q9NP79 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
VTA1Q9NP79 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VTA1Q9NP79 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VTA1Q9NP79 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.85■□□□□ 0.93
VTA1Q9NP79 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
VTA1Q9NP79 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VTA1Q9NP79 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VTA1Q9NP79 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.85■□□□□ 0.93
VTA1Q9NP79 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VTA1Q9NP79 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VTA1Q9NP79 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VTA1Q9NP79 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC20.85■□□□□ 0.93
VTA1Q9NP79 EMBP1-201ENST00000458200 901 ntBASIC20.85■□□□□ 0.93
VTA1Q9NP79 GUSBP12-201ENST00000513727 720 ntBASIC20.85■□□□□ 0.93
VTA1Q9NP79 AC074051.2-201ENST00000565115 352 ntBASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms