Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSU72Q9NP77 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSU72Q9NP77 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SSU72Q9NP77 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
SSU72Q9NP77 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
SSU72Q9NP77 AC097658.1-201ENST00000475555 843 ntBASIC18.55■□□□□ 0.56
SSU72Q9NP77 Z85996.1-201ENST00000494644 937 ntBASIC18.55■□□□□ 0.56
SSU72Q9NP77 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSU72Q9NP77 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSU72Q9NP77 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SSU72Q9NP77 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.55■□□□□ 0.56
SSU72Q9NP77 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.55■□□□□ 0.56
SSU72Q9NP77 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.55■□□□□ 0.56
SSU72Q9NP77 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.55■□□□□ 0.56
SSU72Q9NP77 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SSU72Q9NP77 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SSU72Q9NP77 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSU72Q9NP77 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSU72Q9NP77 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.55■□□□□ 0.56
SSU72Q9NP77 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSU72Q9NP77 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
SSU72Q9NP77 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.55■□□□□ 0.56
SSU72Q9NP77 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.54■□□□□ 0.56
SSU72Q9NP77 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SSU72Q9NP77 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSU72Q9NP77 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.54■□□□□ 0.56
SSU72Q9NP77 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSU72Q9NP77 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSU72Q9NP77 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.54■□□□□ 0.56
SSU72Q9NP77 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.54■□□□□ 0.56
SSU72Q9NP77 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.54■□□□□ 0.56
SSU72Q9NP77 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.54■□□□□ 0.56
SSU72Q9NP77 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSU72Q9NP77 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.54■□□□□ 0.56
SSU72Q9NP77 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSU72Q9NP77 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSU72Q9NP77 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSU72Q9NP77 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSU72Q9NP77 AC026271.2-201ENST00000428091 497 ntBASIC18.54■□□□□ 0.56
SSU72Q9NP77 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.54■□□□□ 0.56
SSU72Q9NP77 AC026185.1-201ENST00000445748 174 ntBASIC18.54■□□□□ 0.56
SSU72Q9NP77 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSU72Q9NP77 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.54■□□□□ 0.56
SSU72Q9NP77 PRSS44-201ENST00000515154 1146 ntBASIC18.54■□□□□ 0.56
SSU72Q9NP77 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.54■□□□□ 0.56
SSU72Q9NP77 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSU72Q9NP77 SOX15-203ENST00000570788 1093 ntBASIC18.54■□□□□ 0.56
SSU72Q9NP77 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.54■□□□□ 0.56
SSU72Q9NP77 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.54■□□□□ 0.56
SSU72Q9NP77 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SSU72Q9NP77 KRT8P11-201ENST00000409686 1436 ntBASIC18.54■□□□□ 0.56
SSU72Q9NP77 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.54■□□□□ 0.56
SSU72Q9NP77 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.54■□□□□ 0.56
SSU72Q9NP77 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.54■□□□□ 0.56
SSU72Q9NP77 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.54■□□□□ 0.56
SSU72Q9NP77 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.54■□□□□ 0.56
SSU72Q9NP77 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SSU72Q9NP77 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSU72Q9NP77 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SSU72Q9NP77 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SSU72Q9NP77 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SSU72Q9NP77 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
SSU72Q9NP77 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.53■□□□□ 0.56
SSU72Q9NP77 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SSU72Q9NP77 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SSU72Q9NP77 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SSU72Q9NP77 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.53■□□□□ 0.56
SSU72Q9NP77 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
SSU72Q9NP77 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SSU72Q9NP77 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SSU72Q9NP77 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SSU72Q9NP77 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SSU72Q9NP77 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SSU72Q9NP77 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SSU72Q9NP77 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SSU72Q9NP77 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.53■□□□□ 0.56
SSU72Q9NP77 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.53■□□□□ 0.56
SSU72Q9NP77 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SSU72Q9NP77 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SSU72Q9NP77 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.53■□□□□ 0.56
SSU72Q9NP77 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SSU72Q9NP77 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SSU72Q9NP77 AL645608.8-201ENST00000606034 2086 ntBASIC18.53■□□□□ 0.56
SSU72Q9NP77 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SSU72Q9NP77 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SSU72Q9NP77 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.52■□□□□ 0.56
SSU72Q9NP77 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SSU72Q9NP77 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.52■□□□□ 0.56
SSU72Q9NP77 HTR7P1-201ENST00000538670 1336 ntBASIC18.52■□□□□ 0.56
SSU72Q9NP77 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SSU72Q9NP77 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SSU72Q9NP77 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
SSU72Q9NP77 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SSU72Q9NP77 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
SSU72Q9NP77 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.52■□□□□ 0.56
SSU72Q9NP77 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
SSU72Q9NP77 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SSU72Q9NP77 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.52■□□□□ 0.56
SSU72Q9NP77 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.52■□□□□ 0.56
SSU72Q9NP77 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms