Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC21.64■■□□□ 1.06
VAT1LQ9HCJ6 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
VAT1LQ9HCJ6 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC21.64■■□□□ 1.06
VAT1LQ9HCJ6 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
VAT1LQ9HCJ6 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
VAT1LQ9HCJ6 HEIH-201ENST00000623091 1652 ntBASIC21.64■■□□□ 1.05
VAT1LQ9HCJ6 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
VAT1LQ9HCJ6 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC21.64■■□□□ 1.05
VAT1LQ9HCJ6 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
VAT1LQ9HCJ6 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC21.64■■□□□ 1.05
VAT1LQ9HCJ6 LINC01238-205ENST00000567549 1107 ntBASIC21.64■■□□□ 1.05
VAT1LQ9HCJ6 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC21.64■■□□□ 1.05
VAT1LQ9HCJ6 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
VAT1LQ9HCJ6 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
VAT1LQ9HCJ6 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
VAT1LQ9HCJ6 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
VAT1LQ9HCJ6 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
VAT1LQ9HCJ6 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
VAT1LQ9HCJ6 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
VAT1LQ9HCJ6 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
VAT1LQ9HCJ6 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
VAT1LQ9HCJ6 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
VAT1LQ9HCJ6 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
VAT1LQ9HCJ6 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
VAT1LQ9HCJ6 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC21.63■■□□□ 1.05
VAT1LQ9HCJ6 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
VAT1LQ9HCJ6 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
VAT1LQ9HCJ6 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
VAT1LQ9HCJ6 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
VAT1LQ9HCJ6 NFYC-AS1-201ENST00000606277 1687 ntBASIC21.63■■□□□ 1.05
VAT1LQ9HCJ6 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
VAT1LQ9HCJ6 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
VAT1LQ9HCJ6 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
VAT1LQ9HCJ6 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC21.63■■□□□ 1.05
VAT1LQ9HCJ6 KRT18P23-201ENST00000435622 1283 ntBASIC21.63■■□□□ 1.05
VAT1LQ9HCJ6 ELP6-205ENST00000439305 880 ntTSL 2 BASIC21.63■■□□□ 1.05
VAT1LQ9HCJ6 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC21.63■■□□□ 1.05
VAT1LQ9HCJ6 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
VAT1LQ9HCJ6 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
VAT1LQ9HCJ6 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC21.63■■□□□ 1.05
VAT1LQ9HCJ6 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
VAT1LQ9HCJ6 AC112497.1-201ENST00000624824 639 ntBASIC21.63■■□□□ 1.05
VAT1LQ9HCJ6 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC21.63■■□□□ 1.05
VAT1LQ9HCJ6 AL357033.4-201ENST00000617703 1807 ntBASIC21.63■■□□□ 1.05
VAT1LQ9HCJ6 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC21.63■■□□□ 1.05
VAT1LQ9HCJ6 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
VAT1LQ9HCJ6 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
VAT1LQ9HCJ6 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC21.63■■□□□ 1.05
VAT1LQ9HCJ6 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC21.63■■□□□ 1.05
VAT1LQ9HCJ6 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
VAT1LQ9HCJ6 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
VAT1LQ9HCJ6 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
VAT1LQ9HCJ6 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
VAT1LQ9HCJ6 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
VAT1LQ9HCJ6 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
VAT1LQ9HCJ6 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
VAT1LQ9HCJ6 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
VAT1LQ9HCJ6 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
VAT1LQ9HCJ6 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
VAT1LQ9HCJ6 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC21.62■■□□□ 1.05
VAT1LQ9HCJ6 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC21.62■■□□□ 1.05
VAT1LQ9HCJ6 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
VAT1LQ9HCJ6 COPE-203ENST00000351079 907 ntTSL 2 BASIC21.62■■□□□ 1.05
VAT1LQ9HCJ6 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
VAT1LQ9HCJ6 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
VAT1LQ9HCJ6 SAPCD2P2-201ENST00000431719 1174 ntBASIC21.62■■□□□ 1.05
VAT1LQ9HCJ6 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
VAT1LQ9HCJ6 HOMER2P1-201ENST00000455653 964 ntBASIC21.62■■□□□ 1.05
VAT1LQ9HCJ6 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC21.62■■□□□ 1.05
VAT1LQ9HCJ6 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC21.62■■□□□ 1.05
VAT1LQ9HCJ6 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC21.62■■□□□ 1.05
VAT1LQ9HCJ6 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC21.62■■□□□ 1.05
VAT1LQ9HCJ6 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
VAT1LQ9HCJ6 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
VAT1LQ9HCJ6 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC21.62■■□□□ 1.05
VAT1LQ9HCJ6 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
VAT1LQ9HCJ6 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21.62■■□□□ 1.05
VAT1LQ9HCJ6 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
VAT1LQ9HCJ6 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
VAT1LQ9HCJ6 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
VAT1LQ9HCJ6 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC21.61■■□□□ 1.05
VAT1LQ9HCJ6 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
VAT1LQ9HCJ6 AC006333.2-201ENST00000607957 2099 ntBASIC21.61■■□□□ 1.05
VAT1LQ9HCJ6 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
VAT1LQ9HCJ6 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
VAT1LQ9HCJ6 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
VAT1LQ9HCJ6 GRAMD4P1-201ENST00000435181 1110 ntBASIC21.61■■□□□ 1.05
VAT1LQ9HCJ6 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC21.61■■□□□ 1.05
VAT1LQ9HCJ6 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
VAT1LQ9HCJ6 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC21.61■■□□□ 1.05
VAT1LQ9HCJ6 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC21.61■■□□□ 1.05
VAT1LQ9HCJ6 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC21.61■■□□□ 1.05
VAT1LQ9HCJ6 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
VAT1LQ9HCJ6 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC21.61■■□□□ 1.05
VAT1LQ9HCJ6 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
VAT1LQ9HCJ6 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
VAT1LQ9HCJ6 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
VAT1LQ9HCJ6 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
VAT1LQ9HCJ6 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC21.6■■□□□ 1.05
VAT1LQ9HCJ6 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms