Protein–RNA interactions for Protein: Q9H254

SPTBN4, Spectrin beta chain, non-erythrocytic 4, humanhuman

Predictions only

Length 2,564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4Q9H254 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SPTBN4Q9H254 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SPTBN4Q9H254 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SPTBN4Q9H254 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
SPTBN4Q9H254 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SPTBN4Q9H254 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SPTBN4Q9H254 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SPTBN4Q9H254 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.75■□□□□ 0.43
SPTBN4Q9H254 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.75■□□□□ 0.43
SPTBN4Q9H254 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.75■□□□□ 0.43
SPTBN4Q9H254 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
SPTBN4Q9H254 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.75■□□□□ 0.43
SPTBN4Q9H254 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SPTBN4Q9H254 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SPTBN4Q9H254 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SPTBN4Q9H254 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SPTBN4Q9H254 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.74■□□□□ 0.43
SPTBN4Q9H254 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SPTBN4Q9H254 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.74■□□□□ 0.43
SPTBN4Q9H254 RNA5SP421-201ENST00000516864 134 ntBASIC17.74■□□□□ 0.43
SPTBN4Q9H254 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.74■□□□□ 0.43
SPTBN4Q9H254 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.74■□□□□ 0.43
SPTBN4Q9H254 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SPTBN4Q9H254 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.74■□□□□ 0.43
SPTBN4Q9H254 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SPTBN4Q9H254 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SPTBN4Q9H254 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.74■□□□□ 0.43
SPTBN4Q9H254 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC17.74■□□□□ 0.43
SPTBN4Q9H254 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.74■□□□□ 0.43
SPTBN4Q9H254 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SPTBN4Q9H254 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SPTBN4Q9H254 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
SPTBN4Q9H254 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SPTBN4Q9H254 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
SPTBN4Q9H254 TSPY16P-201ENST00000449843 468 ntBASIC17.74■□□□□ 0.43
SPTBN4Q9H254 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SPTBN4Q9H254 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SPTBN4Q9H254 AC073592.5-201ENST00000624854 528 ntBASIC17.74■□□□□ 0.43
SPTBN4Q9H254 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SPTBN4Q9H254 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SPTBN4Q9H254 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.74■□□□□ 0.43
SPTBN4Q9H254 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SPTBN4Q9H254 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SPTBN4Q9H254 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SPTBN4Q9H254 KRT89P-201ENST00000620027 1478 ntBASIC17.73■□□□□ 0.43
SPTBN4Q9H254 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
SPTBN4Q9H254 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
SPTBN4Q9H254 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SPTBN4Q9H254 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SPTBN4Q9H254 AC236430.1-201ENST00000402231 743 ntBASIC17.73■□□□□ 0.43
SPTBN4Q9H254 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.73■□□□□ 0.43
SPTBN4Q9H254 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.73■□□□□ 0.43
SPTBN4Q9H254 MIR6799-201ENST00000620297 69 ntBASIC17.73■□□□□ 0.43
SPTBN4Q9H254 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SPTBN4Q9H254 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SPTBN4Q9H254 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.73■□□□□ 0.43
SPTBN4Q9H254 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SPTBN4Q9H254 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SPTBN4Q9H254 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.73■□□□□ 0.43
SPTBN4Q9H254 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
SPTBN4Q9H254 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SPTBN4Q9H254 AC092902.6-201ENST00000641783 218 ntBASIC17.73■□□□□ 0.43
SPTBN4Q9H254 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SPTBN4Q9H254 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SPTBN4Q9H254 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
SPTBN4Q9H254 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SPTBN4Q9H254 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SPTBN4Q9H254 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SPTBN4Q9H254 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SPTBN4Q9H254 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.72■□□□□ 0.43
SPTBN4Q9H254 KRT18P27-201ENST00000427733 1299 ntBASIC17.72■□□□□ 0.43
SPTBN4Q9H254 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.72■□□□□ 0.43
SPTBN4Q9H254 POLD4-211ENST00000539074 714 ntTSL 3 BASIC17.72■□□□□ 0.43
SPTBN4Q9H254 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.72■□□□□ 0.43
SPTBN4Q9H254 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SPTBN4Q9H254 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SPTBN4Q9H254 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SPTBN4Q9H254 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SPTBN4Q9H254 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SPTBN4Q9H254 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SPTBN4Q9H254 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SPTBN4Q9H254 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
SPTBN4Q9H254 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SPTBN4Q9H254 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SPTBN4Q9H254 CRB3P1-201ENST00000449338 276 ntBASIC17.72■□□□□ 0.43
SPTBN4Q9H254 AC104390.1-201ENST00000555663 520 ntBASIC17.72■□□□□ 0.43
SPTBN4Q9H254 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC17.72■□□□□ 0.43
SPTBN4Q9H254 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC17.72■□□□□ 0.43
SPTBN4Q9H254 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SPTBN4Q9H254 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SPTBN4Q9H254 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.71■□□□□ 0.43
SPTBN4Q9H254 AL031432.2-201ENST00000566714 459 ntBASIC17.71■□□□□ 0.43
SPTBN4Q9H254 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
SPTBN4Q9H254 AL928711.1-201ENST00000570165 459 ntBASIC17.71■□□□□ 0.43
SPTBN4Q9H254 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC17.71■□□□□ 0.43
SPTBN4Q9H254 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.71■□□□□ 0.43
SPTBN4Q9H254 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.71■□□□□ 0.43
SPTBN4Q9H254 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SPTBN4Q9H254 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SPTBN4Q9H254 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms