Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CYSTM1Q9H1C7 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CYSTM1Q9H1C7 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC10.85□□□□□ -0.67
CYSTM1Q9H1C7 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CYSTM1Q9H1C7 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CYSTM1Q9H1C7 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CYSTM1Q9H1C7 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
CYSTM1Q9H1C7 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CYSTM1Q9H1C7 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC10.85□□□□□ -0.67
CYSTM1Q9H1C7 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC10.85□□□□□ -0.67
CYSTM1Q9H1C7 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC10.85□□□□□ -0.67
CYSTM1Q9H1C7 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
CYSTM1Q9H1C7 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CYSTM1Q9H1C7 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CYSTM1Q9H1C7 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC10.84□□□□□ -0.67
CYSTM1Q9H1C7 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CYSTM1Q9H1C7 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CYSTM1Q9H1C7 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC10.84□□□□□ -0.67
CYSTM1Q9H1C7 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
CYSTM1Q9H1C7 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CYSTM1Q9H1C7 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
CYSTM1Q9H1C7 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CYSTM1Q9H1C7 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
CYSTM1Q9H1C7 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
CYSTM1Q9H1C7 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CYSTM1Q9H1C7 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
CYSTM1Q9H1C7 DUX4L13-201ENST00000554103 1267 ntBASIC10.84□□□□□ -0.67
CYSTM1Q9H1C7 DUX4L4-201ENST00000566884 1269 ntBASIC10.84□□□□□ -0.67
CYSTM1Q9H1C7 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CYSTM1Q9H1C7 DUX4L15-201ENST00000611059 1267 ntBASIC10.84□□□□□ -0.67
CYSTM1Q9H1C7 DUX4L23-201ENST00000615195 1269 ntBASIC10.84□□□□□ -0.67
CYSTM1Q9H1C7 DUX4L24-201ENST00000617576 1269 ntBASIC10.84□□□□□ -0.67
CYSTM1Q9H1C7 DUX4L22-201ENST00000618238 1269 ntBASIC10.84□□□□□ -0.67
CYSTM1Q9H1C7 DUX4L20-201ENST00000619712 1269 ntBASIC10.84□□□□□ -0.67
CYSTM1Q9H1C7 DUX4L21-201ENST00000622058 1269 ntBASIC10.84□□□□□ -0.67
CYSTM1Q9H1C7 DUX4L10-201ENST00000622460 1267 ntBASIC10.84□□□□□ -0.67
CYSTM1Q9H1C7 DUX4L25-201ENST00000624915 1269 ntBASIC10.84□□□□□ -0.67
CYSTM1Q9H1C7 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CYSTM1Q9H1C7 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CYSTM1Q9H1C7 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC10.84□□□□□ -0.67
CYSTM1Q9H1C7 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC10.84□□□□□ -0.67
CYSTM1Q9H1C7 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
CYSTM1Q9H1C7 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
CYSTM1Q9H1C7 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
CYSTM1Q9H1C7 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CYSTM1Q9H1C7 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CYSTM1Q9H1C7 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CYSTM1Q9H1C7 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CYSTM1Q9H1C7 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CYSTM1Q9H1C7 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CYSTM1Q9H1C7 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC10.84□□□□□ -0.67
CYSTM1Q9H1C7 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CYSTM1Q9H1C7 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC10.84□□□□□ -0.67
CYSTM1Q9H1C7 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CYSTM1Q9H1C7 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CYSTM1Q9H1C7 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC10.84□□□□□ -0.67
CYSTM1Q9H1C7 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC10.84□□□□□ -0.67
CYSTM1Q9H1C7 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CYSTM1Q9H1C7 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
CYSTM1Q9H1C7 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
CYSTM1Q9H1C7 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CYSTM1Q9H1C7 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CYSTM1Q9H1C7 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CYSTM1Q9H1C7 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CYSTM1Q9H1C7 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CYSTM1Q9H1C7 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CYSTM1Q9H1C7 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.67
CYSTM1Q9H1C7 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC10.83□□□□□ -0.67
CYSTM1Q9H1C7 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
CYSTM1Q9H1C7 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
CYSTM1Q9H1C7 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CYSTM1Q9H1C7 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
CYSTM1Q9H1C7 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CYSTM1Q9H1C7 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CYSTM1Q9H1C7 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CYSTM1Q9H1C7 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CYSTM1Q9H1C7 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
CYSTM1Q9H1C7 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC10.83□□□□□ -0.68
CYSTM1Q9H1C7 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC10.83□□□□□ -0.68
CYSTM1Q9H1C7 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC10.83□□□□□ -0.68
CYSTM1Q9H1C7 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CYSTM1Q9H1C7 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC10.83□□□□□ -0.68
CYSTM1Q9H1C7 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC10.83□□□□□ -0.68
CYSTM1Q9H1C7 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CYSTM1Q9H1C7 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CYSTM1Q9H1C7 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CYSTM1Q9H1C7 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CYSTM1Q9H1C7 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC10.83□□□□□ -0.68
CYSTM1Q9H1C7 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CYSTM1Q9H1C7 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC10.83□□□□□ -0.68
CYSTM1Q9H1C7 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC10.83□□□□□ -0.68
CYSTM1Q9H1C7 AC008813.1-201ENST00000536597 885 ntBASIC10.83□□□□□ -0.68
CYSTM1Q9H1C7 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
CYSTM1Q9H1C7 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
CYSTM1Q9H1C7 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
CYSTM1Q9H1C7 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
CYSTM1Q9H1C7 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
CYSTM1Q9H1C7 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
CYSTM1Q9H1C7 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
CYSTM1Q9H1C7 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms