Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
POLR2J3Q9H1A7 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.29■□□□□ 0.36
POLR2J3Q9H1A7 ID1-201ENST00000376105 1233 ntBASIC17.29■□□□□ 0.36
POLR2J3Q9H1A7 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
POLR2J3Q9H1A7 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.29■□□□□ 0.36
POLR2J3Q9H1A7 NIFKP9-201ENST00000419265 221 ntBASIC17.29■□□□□ 0.36
POLR2J3Q9H1A7 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
POLR2J3Q9H1A7 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.29■□□□□ 0.36
POLR2J3Q9H1A7 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.29■□□□□ 0.36
POLR2J3Q9H1A7 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.29■□□□□ 0.36
POLR2J3Q9H1A7 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
POLR2J3Q9H1A7 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.29■□□□□ 0.36
POLR2J3Q9H1A7 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.29■□□□□ 0.36
POLR2J3Q9H1A7 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
POLR2J3Q9H1A7 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
POLR2J3Q9H1A7 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
POLR2J3Q9H1A7 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
POLR2J3Q9H1A7 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
POLR2J3Q9H1A7 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
POLR2J3Q9H1A7 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
POLR2J3Q9H1A7 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
POLR2J3Q9H1A7 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
POLR2J3Q9H1A7 KRT8P3-201ENST00000519669 1449 ntBASIC17.29■□□□□ 0.36
POLR2J3Q9H1A7 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
POLR2J3Q9H1A7 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
POLR2J3Q9H1A7 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
POLR2J3Q9H1A7 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
POLR2J3Q9H1A7 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
POLR2J3Q9H1A7 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.28■□□□□ 0.36
POLR2J3Q9H1A7 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
POLR2J3Q9H1A7 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
POLR2J3Q9H1A7 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
POLR2J3Q9H1A7 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.28■□□□□ 0.36
POLR2J3Q9H1A7 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.28■□□□□ 0.36
POLR2J3Q9H1A7 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
POLR2J3Q9H1A7 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
POLR2J3Q9H1A7 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
POLR2J3Q9H1A7 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
POLR2J3Q9H1A7 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.28■□□□□ 0.36
POLR2J3Q9H1A7 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.28■□□□□ 0.36
POLR2J3Q9H1A7 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
POLR2J3Q9H1A7 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
POLR2J3Q9H1A7 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
POLR2J3Q9H1A7 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.28■□□□□ 0.36
POLR2J3Q9H1A7 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.28■□□□□ 0.36
POLR2J3Q9H1A7 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.28■□□□□ 0.36
POLR2J3Q9H1A7 AC126763.1-201ENST00000552015 2118 ntBASIC17.28■□□□□ 0.36
POLR2J3Q9H1A7 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.28■□□□□ 0.36
POLR2J3Q9H1A7 AC233263.1-201ENST00000578059 224 ntBASIC17.28■□□□□ 0.36
POLR2J3Q9H1A7 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.28■□□□□ 0.36
POLR2J3Q9H1A7 AC124016.1-201ENST00000609552 612 ntBASIC17.28■□□□□ 0.36
POLR2J3Q9H1A7 AC068587.9-201ENST00000641814 219 ntBASIC17.28■□□□□ 0.36
POLR2J3Q9H1A7 OR6D1P-202ENST00000641007 5290 ntBASIC17.28■□□□□ 0.36
POLR2J3Q9H1A7 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
POLR2J3Q9H1A7 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.28■□□□□ 0.36
POLR2J3Q9H1A7 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
POLR2J3Q9H1A7 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
POLR2J3Q9H1A7 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
POLR2J3Q9H1A7 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
POLR2J3Q9H1A7 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
POLR2J3Q9H1A7 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
POLR2J3Q9H1A7 AC068880.1-201ENST00000507289 2297 ntBASIC17.28■□□□□ 0.36
POLR2J3Q9H1A7 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
POLR2J3Q9H1A7 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.28■□□□□ 0.36
POLR2J3Q9H1A7 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
POLR2J3Q9H1A7 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
POLR2J3Q9H1A7 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
POLR2J3Q9H1A7 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
POLR2J3Q9H1A7 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
POLR2J3Q9H1A7 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
POLR2J3Q9H1A7 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.27■□□□□ 0.36
POLR2J3Q9H1A7 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
POLR2J3Q9H1A7 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.27■□□□□ 0.36
POLR2J3Q9H1A7 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
POLR2J3Q9H1A7 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
POLR2J3Q9H1A7 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
POLR2J3Q9H1A7 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.27■□□□□ 0.36
POLR2J3Q9H1A7 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
POLR2J3Q9H1A7 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
POLR2J3Q9H1A7 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.27■□□□□ 0.36
POLR2J3Q9H1A7 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
POLR2J3Q9H1A7 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.27■□□□□ 0.36
POLR2J3Q9H1A7 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.27■□□□□ 0.36
POLR2J3Q9H1A7 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
POLR2J3Q9H1A7 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.27■□□□□ 0.36
POLR2J3Q9H1A7 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.27■□□□□ 0.36
POLR2J3Q9H1A7 AL353807.1-201ENST00000427475 662 ntBASIC17.27■□□□□ 0.36
POLR2J3Q9H1A7 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.27■□□□□ 0.36
POLR2J3Q9H1A7 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
POLR2J3Q9H1A7 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
POLR2J3Q9H1A7 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
POLR2J3Q9H1A7 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
POLR2J3Q9H1A7 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
POLR2J3Q9H1A7 KRT8P11-201ENST00000409686 1436 ntBASIC17.27■□□□□ 0.35
POLR2J3Q9H1A7 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
POLR2J3Q9H1A7 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.27■□□□□ 0.35
POLR2J3Q9H1A7 AL162741.1-201ENST00000565563 1558 ntBASIC17.27■□□□□ 0.35
POLR2J3Q9H1A7 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
POLR2J3Q9H1A7 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.27■□□□□ 0.35
POLR2J3Q9H1A7 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms