Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCGF1Q9BSM1 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PCGF1Q9BSM1 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
PCGF1Q9BSM1 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PCGF1Q9BSM1 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCGF1Q9BSM1 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCGF1Q9BSM1 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC15.66■□□□□ 0.1
PCGF1Q9BSM1 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PCGF1Q9BSM1 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC15.66■□□□□ 0.1
PCGF1Q9BSM1 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCGF1Q9BSM1 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
PCGF1Q9BSM1 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC15.66■□□□□ 0.1
PCGF1Q9BSM1 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCGF1Q9BSM1 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC15.66■□□□□ 0.1
PCGF1Q9BSM1 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCGF1Q9BSM1 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCGF1Q9BSM1 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCGF1Q9BSM1 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PCGF1Q9BSM1 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCGF1Q9BSM1 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCGF1Q9BSM1 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PCGF1Q9BSM1 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC15.66■□□□□ 0.1
PCGF1Q9BSM1 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC15.66■□□□□ 0.1
PCGF1Q9BSM1 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCGF1Q9BSM1 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PCGF1Q9BSM1 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PCGF1Q9BSM1 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCGF1Q9BSM1 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCGF1Q9BSM1 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCGF1Q9BSM1 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCGF1Q9BSM1 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
PCGF1Q9BSM1 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCGF1Q9BSM1 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC15.65■□□□□ 0.1
PCGF1Q9BSM1 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCGF1Q9BSM1 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCGF1Q9BSM1 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCGF1Q9BSM1 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCGF1Q9BSM1 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
PCGF1Q9BSM1 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCGF1Q9BSM1 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCGF1Q9BSM1 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
PCGF1Q9BSM1 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
PCGF1Q9BSM1 AC010203.1-204ENST00000548782 407 ntBASIC15.65■□□□□ 0.1
PCGF1Q9BSM1 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.65■□□□□ 0.1
PCGF1Q9BSM1 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCGF1Q9BSM1 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCGF1Q9BSM1 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC15.65■□□□□ 0.1
PCGF1Q9BSM1 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC15.65■□□□□ 0.1
PCGF1Q9BSM1 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
PCGF1Q9BSM1 AL049812.1-201ENST00000432563 2267 ntBASIC15.65■□□□□ 0.1
PCGF1Q9BSM1 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCGF1Q9BSM1 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
PCGF1Q9BSM1 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
PCGF1Q9BSM1 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCGF1Q9BSM1 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCGF1Q9BSM1 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCGF1Q9BSM1 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
PCGF1Q9BSM1 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCGF1Q9BSM1 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCGF1Q9BSM1 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCGF1Q9BSM1 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
PCGF1Q9BSM1 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCGF1Q9BSM1 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCGF1Q9BSM1 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCGF1Q9BSM1 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
PCGF1Q9BSM1 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCGF1Q9BSM1 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
PCGF1Q9BSM1 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCGF1Q9BSM1 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCGF1Q9BSM1 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCGF1Q9BSM1 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
PCGF1Q9BSM1 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCGF1Q9BSM1 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCGF1Q9BSM1 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCGF1Q9BSM1 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PCGF1Q9BSM1 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCGF1Q9BSM1 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
PCGF1Q9BSM1 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC15.64■□□□□ 0.09
PCGF1Q9BSM1 HMGA1P5-201ENST00000412453 271 ntBASIC15.64■□□□□ 0.09
PCGF1Q9BSM1 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PCGF1Q9BSM1 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
PCGF1Q9BSM1 TSPY17P-201ENST00000450329 467 ntBASIC15.64■□□□□ 0.09
PCGF1Q9BSM1 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCGF1Q9BSM1 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC15.64■□□□□ 0.09
PCGF1Q9BSM1 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC15.64■□□□□ 0.09
PCGF1Q9BSM1 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
PCGF1Q9BSM1 GPX4-207ENST00000589115 812 ntTSL 2 BASIC15.64■□□□□ 0.09
PCGF1Q9BSM1 FAM87A-204ENST00000613235 858 ntBASIC15.64■□□□□ 0.09
PCGF1Q9BSM1 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
PCGF1Q9BSM1 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCGF1Q9BSM1 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC15.64■□□□□ 0.09
PCGF1Q9BSM1 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCGF1Q9BSM1 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCGF1Q9BSM1 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCGF1Q9BSM1 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCGF1Q9BSM1 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCGF1Q9BSM1 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCGF1Q9BSM1 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PCGF1Q9BSM1 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCGF1Q9BSM1 AC141586.3-201ENST00000562166 1838 ntBASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms