Protein–RNA interactions for Protein: Q9BQP9

BPIFA3, BPI fold-containing family A member 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BPIFA3Q9BQP9 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
BPIFA3Q9BQP9 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
BPIFA3Q9BQP9 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
BPIFA3Q9BQP9 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.68■□□□□ 0.9
BPIFA3Q9BQP9 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.68■□□□□ 0.9
BPIFA3Q9BQP9 KRT16P5-201ENST00000455284 522 ntBASIC20.68■□□□□ 0.9
BPIFA3Q9BQP9 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.68■□□□□ 0.9
BPIFA3Q9BQP9 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
BPIFA3Q9BQP9 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.68■□□□□ 0.9
BPIFA3Q9BQP9 AC142086.2-201ENST00000569753 217 ntBASIC20.68■□□□□ 0.9
BPIFA3Q9BQP9 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.68■□□□□ 0.9
BPIFA3Q9BQP9 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BPIFA3Q9BQP9 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.68■□□□□ 0.9
BPIFA3Q9BQP9 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
BPIFA3Q9BQP9 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BPIFA3Q9BQP9 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
BPIFA3Q9BQP9 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BPIFA3Q9BQP9 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
BPIFA3Q9BQP9 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BPIFA3Q9BQP9 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BPIFA3Q9BQP9 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
BPIFA3Q9BQP9 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC20.67■□□□□ 0.9
BPIFA3Q9BQP9 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
BPIFA3Q9BQP9 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BPIFA3Q9BQP9 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BPIFA3Q9BQP9 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.67■□□□□ 0.9
BPIFA3Q9BQP9 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.67■□□□□ 0.9
BPIFA3Q9BQP9 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
BPIFA3Q9BQP9 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.67■□□□□ 0.9
BPIFA3Q9BQP9 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.67■□□□□ 0.9
BPIFA3Q9BQP9 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
BPIFA3Q9BQP9 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
BPIFA3Q9BQP9 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BPIFA3Q9BQP9 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20.67■□□□□ 0.9
BPIFA3Q9BQP9 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.67■□□□□ 0.9
BPIFA3Q9BQP9 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
BPIFA3Q9BQP9 AC004980.1-204ENST00000429707 299 ntBASIC20.67■□□□□ 0.9
BPIFA3Q9BQP9 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
BPIFA3Q9BQP9 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.67■□□□□ 0.9
BPIFA3Q9BQP9 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
BPIFA3Q9BQP9 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC20.67■□□□□ 0.9
BPIFA3Q9BQP9 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BPIFA3Q9BQP9 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
BPIFA3Q9BQP9 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BPIFA3Q9BQP9 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.67■□□□□ 0.9
BPIFA3Q9BQP9 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BPIFA3Q9BQP9 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BPIFA3Q9BQP9 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
BPIFA3Q9BQP9 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
BPIFA3Q9BQP9 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC20.67■□□□□ 0.9
BPIFA3Q9BQP9 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BPIFA3Q9BQP9 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
BPIFA3Q9BQP9 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BPIFA3Q9BQP9 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
BPIFA3Q9BQP9 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
BPIFA3Q9BQP9 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.66■□□□□ 0.9
BPIFA3Q9BQP9 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BPIFA3Q9BQP9 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BPIFA3Q9BQP9 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.66■□□□□ 0.9
BPIFA3Q9BQP9 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.66■□□□□ 0.9
BPIFA3Q9BQP9 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.66■□□□□ 0.9
BPIFA3Q9BQP9 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
BPIFA3Q9BQP9 AC131212.4-201ENST00000623606 975 ntBASIC20.66■□□□□ 0.9
BPIFA3Q9BQP9 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.66■□□□□ 0.9
BPIFA3Q9BQP9 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BPIFA3Q9BQP9 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BPIFA3Q9BQP9 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
BPIFA3Q9BQP9 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BPIFA3Q9BQP9 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BPIFA3Q9BQP9 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BPIFA3Q9BQP9 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BPIFA3Q9BQP9 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC20.66■□□□□ 0.9
BPIFA3Q9BQP9 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
BPIFA3Q9BQP9 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BPIFA3Q9BQP9 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
BPIFA3Q9BQP9 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BPIFA3Q9BQP9 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BPIFA3Q9BQP9 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
BPIFA3Q9BQP9 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BPIFA3Q9BQP9 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
BPIFA3Q9BQP9 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.65■□□□□ 0.9
BPIFA3Q9BQP9 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
BPIFA3Q9BQP9 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.65■□□□□ 0.9
BPIFA3Q9BQP9 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.65■□□□□ 0.9
BPIFA3Q9BQP9 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.65■□□□□ 0.9
BPIFA3Q9BQP9 AC069544.1-201ENST00000609399 999 ntBASIC20.65■□□□□ 0.9
BPIFA3Q9BQP9 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.65■□□□□ 0.9
BPIFA3Q9BQP9 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.65■□□□□ 0.9
BPIFA3Q9BQP9 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BPIFA3Q9BQP9 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BPIFA3Q9BQP9 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
BPIFA3Q9BQP9 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BPIFA3Q9BQP9 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC20.65■□□□□ 0.9
BPIFA3Q9BQP9 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.65■□□□□ 0.9
BPIFA3Q9BQP9 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
BPIFA3Q9BQP9 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
BPIFA3Q9BQP9 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
BPIFA3Q9BQP9 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
BPIFA3Q9BQP9 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
BPIFA3Q9BQP9 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC20.64■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms