Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ARID3AQ99856 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ARID3AQ99856 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ARID3AQ99856 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
ARID3AQ99856 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
ARID3AQ99856 TSPY20P-201ENST00000450910 630 ntBASIC21.19■□□□□ 0.98
ARID3AQ99856 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.19■□□□□ 0.98
ARID3AQ99856 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.19■□□□□ 0.98
ARID3AQ99856 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.19■□□□□ 0.98
ARID3AQ99856 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
ARID3AQ99856 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ARID3AQ99856 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
ARID3AQ99856 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC21.19■□□□□ 0.98
ARID3AQ99856 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ARID3AQ99856 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
ARID3AQ99856 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ARID3AQ99856 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
ARID3AQ99856 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
ARID3AQ99856 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ARID3AQ99856 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ARID3AQ99856 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ARID3AQ99856 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ARID3AQ99856 AP001271.2-201ENST00000624018 1556 ntBASIC21.19■□□□□ 0.98
ARID3AQ99856 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
ARID3AQ99856 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ARID3AQ99856 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ARID3AQ99856 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC21.18■□□□□ 0.98
ARID3AQ99856 LINC01465-201ENST00000408887 1940 ntBASIC21.18■□□□□ 0.98
ARID3AQ99856 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ARID3AQ99856 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
ARID3AQ99856 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ARID3AQ99856 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.18■□□□□ 0.98
ARID3AQ99856 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
ARID3AQ99856 ESRRAP1-201ENST00000400596 1257 ntBASIC21.18■□□□□ 0.98
ARID3AQ99856 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ARID3AQ99856 AC026366.1-201ENST00000488803 879 ntBASIC21.18■□□□□ 0.98
ARID3AQ99856 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ARID3AQ99856 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.18■□□□□ 0.98
ARID3AQ99856 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.18■□□□□ 0.98
ARID3AQ99856 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.18■□□□□ 0.98
ARID3AQ99856 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ARID3AQ99856 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
ARID3AQ99856 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ARID3AQ99856 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC21.18■□□□□ 0.98
ARID3AQ99856 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ARID3AQ99856 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.18■□□□□ 0.98
ARID3AQ99856 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
ARID3AQ99856 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ARID3AQ99856 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ARID3AQ99856 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ARID3AQ99856 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ARID3AQ99856 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ARID3AQ99856 ABHD17AP1-201ENST00000358206 933 ntBASIC21.17■□□□□ 0.98
ARID3AQ99856 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC21.17■□□□□ 0.98
ARID3AQ99856 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ARID3AQ99856 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ARID3AQ99856 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
ARID3AQ99856 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ARID3AQ99856 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.17■□□□□ 0.98
ARID3AQ99856 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ARID3AQ99856 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ARID3AQ99856 TFP1-202ENST00000475455 1573 ntBASIC21.17■□□□□ 0.98
ARID3AQ99856 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ARID3AQ99856 TREX1-205ENST00000625293 1783 ntBASIC21.17■□□□□ 0.98
ARID3AQ99856 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
ARID3AQ99856 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ARID3AQ99856 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ARID3AQ99856 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ARID3AQ99856 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
ARID3AQ99856 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ARID3AQ99856 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC21.16■□□□□ 0.98
ARID3AQ99856 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ARID3AQ99856 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
ARID3AQ99856 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC21.16■□□□□ 0.98
ARID3AQ99856 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ARID3AQ99856 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ARID3AQ99856 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ARID3AQ99856 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ARID3AQ99856 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ARID3AQ99856 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ARID3AQ99856 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
ARID3AQ99856 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
ARID3AQ99856 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ARID3AQ99856 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
ARID3AQ99856 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.16■□□□□ 0.98
ARID3AQ99856 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
ARID3AQ99856 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ARID3AQ99856 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC21.16■□□□□ 0.98
ARID3AQ99856 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ARID3AQ99856 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ARID3AQ99856 POM121L13P-201ENST00000422362 380 ntBASIC21.16■□□□□ 0.98
ARID3AQ99856 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.16■□□□□ 0.98
ARID3AQ99856 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.16■□□□□ 0.98
ARID3AQ99856 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ARID3AQ99856 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ARID3AQ99856 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ARID3AQ99856 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ARID3AQ99856 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.16■□□□□ 0.98
ARID3AQ99856 CROCCP3-202ENST00000420820 1947 ntBASIC21.16■□□□□ 0.98
ARID3AQ99856 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms