Protein–RNA interactions for Protein: Q99504

EYA3, Eyes absent homolog 3, humanhuman

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EYA3Q99504 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
EYA3Q99504 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
EYA3Q99504 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC22.68■■□□□ 1.22
EYA3Q99504 DFFB-203ENST00000341385 572 ntTSL 5 BASIC22.68■■□□□ 1.22
EYA3Q99504 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
EYA3Q99504 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
EYA3Q99504 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
EYA3Q99504 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC22.68■■□□□ 1.22
EYA3Q99504 AC106795.1-205ENST00000512851 1056 ntBASIC22.68■■□□□ 1.22
EYA3Q99504 AP002469.2-201ENST00000531724 424 ntBASIC22.68■■□□□ 1.22
EYA3Q99504 AL662844.1-201ENST00000546340 181 ntBASIC22.68■■□□□ 1.22
EYA3Q99504 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC22.68■■□□□ 1.22
EYA3Q99504 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
EYA3Q99504 AL121912.1-201ENST00000603683 238 ntBASIC22.68■■□□□ 1.22
EYA3Q99504 AL353801.3-201ENST00000609898 542 ntBASIC22.68■■□□□ 1.22
EYA3Q99504 AL592071.1-201ENST00000611956 408 ntBASIC22.68■■□□□ 1.22
EYA3Q99504 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
EYA3Q99504 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
EYA3Q99504 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
EYA3Q99504 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC22.68■■□□□ 1.22
EYA3Q99504 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
EYA3Q99504 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
EYA3Q99504 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
EYA3Q99504 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
EYA3Q99504 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
EYA3Q99504 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
EYA3Q99504 CYP51A1P1-201ENST00000492267 1507 ntBASIC22.67■■□□□ 1.22
EYA3Q99504 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC22.67■■□□□ 1.22
EYA3Q99504 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
EYA3Q99504 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
EYA3Q99504 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
EYA3Q99504 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC22.67■■□□□ 1.22
EYA3Q99504 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC22.67■■□□□ 1.22
EYA3Q99504 AL022342.1-201ENST00000400363 863 ntBASIC22.67■■□□□ 1.22
EYA3Q99504 VENTXP7-201ENST00000475503 772 ntBASIC22.67■■□□□ 1.22
EYA3Q99504 PPOX-214ENST00000535223 664 ntTSL 3 BASIC22.67■■□□□ 1.22
EYA3Q99504 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
EYA3Q99504 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC22.67■■□□□ 1.22
EYA3Q99504 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
EYA3Q99504 AC124864.1-201ENST00000623408 392 ntBASIC22.67■■□□□ 1.22
EYA3Q99504 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC22.67■■□□□ 1.22
EYA3Q99504 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
EYA3Q99504 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
EYA3Q99504 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
EYA3Q99504 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC22.66■■□□□ 1.22
EYA3Q99504 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
EYA3Q99504 AC125437.2-201ENST00000625180 2167 ntBASIC22.66■■□□□ 1.22
EYA3Q99504 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
EYA3Q99504 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
EYA3Q99504 IGHV3-47-201ENST00000425060 335 ntBASIC22.66■■□□□ 1.22
EYA3Q99504 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
EYA3Q99504 CALM3-211ENST00000598871 561 ntTSL 4 BASIC22.66■■□□□ 1.22
EYA3Q99504 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC22.66■■□□□ 1.22
EYA3Q99504 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC22.66■■□□□ 1.22
EYA3Q99504 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC22.66■■□□□ 1.22
EYA3Q99504 IRX1P1-201ENST00000438849 1838 ntBASIC22.66■■□□□ 1.22
EYA3Q99504 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC22.66■■□□□ 1.22
EYA3Q99504 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC22.65■■□□□ 1.22
EYA3Q99504 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC22.65■■□□□ 1.22
EYA3Q99504 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
EYA3Q99504 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
EYA3Q99504 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
EYA3Q99504 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
EYA3Q99504 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
EYA3Q99504 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
EYA3Q99504 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC22.65■■□□□ 1.22
EYA3Q99504 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC22.65■■□□□ 1.22
EYA3Q99504 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC22.65■■□□□ 1.22
EYA3Q99504 RN7SL606P-201ENST00000472779 293 ntBASIC22.65■■□□□ 1.22
EYA3Q99504 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC22.65■■□□□ 1.22
EYA3Q99504 REEP1-209ENST00000541910 969 ntTSL 2 BASIC22.65■■□□□ 1.22
EYA3Q99504 SLC25A6P4-201ENST00000586535 553 ntBASIC22.65■■□□□ 1.22
EYA3Q99504 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC22.65■■□□□ 1.22
EYA3Q99504 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC22.65■■□□□ 1.22
EYA3Q99504 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC22.65■■□□□ 1.22
EYA3Q99504 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
EYA3Q99504 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
EYA3Q99504 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC22.65■■□□□ 1.22
EYA3Q99504 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC22.65■■□□□ 1.22
EYA3Q99504 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
EYA3Q99504 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
EYA3Q99504 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
EYA3Q99504 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
EYA3Q99504 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
EYA3Q99504 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
EYA3Q99504 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
EYA3Q99504 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
EYA3Q99504 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
EYA3Q99504 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
EYA3Q99504 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC22.64■■□□□ 1.21
EYA3Q99504 KRT16P4-201ENST00000453883 522 ntBASIC22.64■■□□□ 1.21
EYA3Q99504 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC22.64■■□□□ 1.21
EYA3Q99504 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
EYA3Q99504 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC22.64■■□□□ 1.21
EYA3Q99504 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
EYA3Q99504 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC22.64■■□□□ 1.21
EYA3Q99504 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
EYA3Q99504 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC22.64■■□□□ 1.21
EYA3Q99504 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC22.64■■□□□ 1.21
EYA3Q99504 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms