Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.67■□□□□ 0.74
ATP2A3Q93084 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATP2A3Q93084 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.67■□□□□ 0.74
ATP2A3Q93084 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATP2A3Q93084 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.66■□□□□ 0.74
ATP2A3Q93084 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
ATP2A3Q93084 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATP2A3Q93084 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATP2A3Q93084 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ATP2A3Q93084 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.66■□□□□ 0.74
ATP2A3Q93084 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATP2A3Q93084 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATP2A3Q93084 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ATP2A3Q93084 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATP2A3Q93084 AC104417.2-201ENST00000562989 1793 ntBASIC19.66■□□□□ 0.74
ATP2A3Q93084 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATP2A3Q93084 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.66■□□□□ 0.74
ATP2A3Q93084 AL359075.1-203ENST00000462729 1002 ntBASIC19.66■□□□□ 0.74
ATP2A3Q93084 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ATP2A3Q93084 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.66■□□□□ 0.74
ATP2A3Q93084 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.66■□□□□ 0.74
ATP2A3Q93084 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.66■□□□□ 0.74
ATP2A3Q93084 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.66■□□□□ 0.74
ATP2A3Q93084 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.66■□□□□ 0.74
ATP2A3Q93084 NEK4P2-201ENST00000580004 1012 ntBASIC19.66■□□□□ 0.74
ATP2A3Q93084 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.66■□□□□ 0.74
ATP2A3Q93084 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.66■□□□□ 0.74
ATP2A3Q93084 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATP2A3Q93084 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ATP2A3Q93084 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATP2A3Q93084 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATP2A3Q93084 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATP2A3Q93084 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATP2A3Q93084 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.65■□□□□ 0.74
ATP2A3Q93084 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ATP2A3Q93084 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATP2A3Q93084 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
ATP2A3Q93084 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
ATP2A3Q93084 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
ATP2A3Q93084 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATP2A3Q93084 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATP2A3Q93084 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ATP2A3Q93084 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.65■□□□□ 0.74
ATP2A3Q93084 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.65■□□□□ 0.74
ATP2A3Q93084 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATP2A3Q93084 AP000550.4-202ENST00000639755 178 ntBASIC19.65■□□□□ 0.74
ATP2A3Q93084 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.65■□□□□ 0.74
ATP2A3Q93084 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.65■□□□□ 0.74
ATP2A3Q93084 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATP2A3Q93084 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATP2A3Q93084 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
ATP2A3Q93084 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.65■□□□□ 0.74
ATP2A3Q93084 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.65■□□□□ 0.74
ATP2A3Q93084 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATP2A3Q93084 ZNF815P-204ENST00000434898 1737 ntBASIC19.65■□□□□ 0.74
ATP2A3Q93084 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATP2A3Q93084 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATP2A3Q93084 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ATP2A3Q93084 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
ATP2A3Q93084 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
ATP2A3Q93084 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.64■□□□□ 0.74
ATP2A3Q93084 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATP2A3Q93084 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ATP2A3Q93084 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
ATP2A3Q93084 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ATP2A3Q93084 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATP2A3Q93084 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATP2A3Q93084 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.64■□□□□ 0.73
ATP2A3Q93084 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.64■□□□□ 0.73
ATP2A3Q93084 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATP2A3Q93084 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.64■□□□□ 0.73
ATP2A3Q93084 AL671277.2-201ENST00000458060 996 ntBASIC19.64■□□□□ 0.73
ATP2A3Q93084 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.64■□□□□ 0.73
ATP2A3Q93084 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ATP2A3Q93084 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.64■□□□□ 0.73
ATP2A3Q93084 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.64■□□□□ 0.73
ATP2A3Q93084 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.64■□□□□ 0.73
ATP2A3Q93084 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.64■□□□□ 0.73
ATP2A3Q93084 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.64■□□□□ 0.73
ATP2A3Q93084 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.73
ATP2A3Q93084 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATP2A3Q93084 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATP2A3Q93084 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.64■□□□□ 0.73
ATP2A3Q93084 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
ATP2A3Q93084 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATP2A3Q93084 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
ATP2A3Q93084 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATP2A3Q93084 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATP2A3Q93084 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATP2A3Q93084 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATP2A3Q93084 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
ATP2A3Q93084 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATP2A3Q93084 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
ATP2A3Q93084 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
ATP2A3Q93084 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATP2A3Q93084 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
ATP2A3Q93084 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.63■□□□□ 0.73
ATP2A3Q93084 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATP2A3Q93084 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATP2A3Q93084 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms