Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC22■■□□□ 1.11
STAG1Q8WVM7 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
STAG1Q8WVM7 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
STAG1Q8WVM7 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
STAG1Q8WVM7 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
STAG1Q8WVM7 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
STAG1Q8WVM7 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC21.99■■□□□ 1.11
STAG1Q8WVM7 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
STAG1Q8WVM7 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
STAG1Q8WVM7 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
STAG1Q8WVM7 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
STAG1Q8WVM7 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
STAG1Q8WVM7 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
STAG1Q8WVM7 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
STAG1Q8WVM7 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
STAG1Q8WVM7 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
STAG1Q8WVM7 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC21.99■■□□□ 1.11
STAG1Q8WVM7 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC21.99■■□□□ 1.11
STAG1Q8WVM7 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC21.99■■□□□ 1.11
STAG1Q8WVM7 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC21.99■■□□□ 1.11
STAG1Q8WVM7 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC21.99■■□□□ 1.11
STAG1Q8WVM7 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
STAG1Q8WVM7 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC21.99■■□□□ 1.11
STAG1Q8WVM7 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
STAG1Q8WVM7 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC21.99■■□□□ 1.11
STAG1Q8WVM7 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC21.99■■□□□ 1.11
STAG1Q8WVM7 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC21.98■■□□□ 1.11
STAG1Q8WVM7 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
STAG1Q8WVM7 AL499627.1-201ENST00000569373 2188 ntBASIC21.98■■□□□ 1.11
STAG1Q8WVM7 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
STAG1Q8WVM7 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
STAG1Q8WVM7 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
STAG1Q8WVM7 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
STAG1Q8WVM7 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
STAG1Q8WVM7 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC21.98■■□□□ 1.11
STAG1Q8WVM7 CYP51A1P1-201ENST00000492267 1507 ntBASIC21.98■■□□□ 1.11
STAG1Q8WVM7 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
STAG1Q8WVM7 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
STAG1Q8WVM7 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC21.98■■□□□ 1.11
STAG1Q8WVM7 SAPCD2P2-201ENST00000431719 1174 ntBASIC21.98■■□□□ 1.11
STAG1Q8WVM7 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC21.98■■□□□ 1.11
STAG1Q8WVM7 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
STAG1Q8WVM7 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC21.98■■□□□ 1.11
STAG1Q8WVM7 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC21.98■■□□□ 1.11
STAG1Q8WVM7 NAT14-202ENST00000587400 416 ntTSL 5 BASIC21.98■■□□□ 1.11
STAG1Q8WVM7 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC21.98■■□□□ 1.11
STAG1Q8WVM7 MYC-208ENST00000641036 567 ntBASIC21.98■■□□□ 1.11
STAG1Q8WVM7 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
STAG1Q8WVM7 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
STAG1Q8WVM7 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
STAG1Q8WVM7 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC21.98■■□□□ 1.11
STAG1Q8WVM7 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
STAG1Q8WVM7 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
STAG1Q8WVM7 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
STAG1Q8WVM7 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
STAG1Q8WVM7 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
STAG1Q8WVM7 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC21.97■■□□□ 1.11
STAG1Q8WVM7 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC21.97■■□□□ 1.11
STAG1Q8WVM7 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
STAG1Q8WVM7 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC21.97■■□□□ 1.11
STAG1Q8WVM7 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
STAG1Q8WVM7 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC21.97■■□□□ 1.11
STAG1Q8WVM7 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
STAG1Q8WVM7 AC093503.3-201ENST00000624917 2352 ntBASIC21.97■■□□□ 1.11
STAG1Q8WVM7 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
STAG1Q8WVM7 AC087289.5-201ENST00000586076 3175 ntBASIC21.97■■□□□ 1.11
STAG1Q8WVM7 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
STAG1Q8WVM7 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
STAG1Q8WVM7 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC21.96■■□□□ 1.11
STAG1Q8WVM7 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC21.96■■□□□ 1.11
STAG1Q8WVM7 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
STAG1Q8WVM7 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
STAG1Q8WVM7 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
STAG1Q8WVM7 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
STAG1Q8WVM7 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
STAG1Q8WVM7 AP000593.1-201ENST00000393668 712 ntBASIC21.96■■□□□ 1.11
STAG1Q8WVM7 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC21.96■■□□□ 1.11
STAG1Q8WVM7 AC092647.4-201ENST00000457211 535 ntBASIC21.96■■□□□ 1.11
STAG1Q8WVM7 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC21.96■■□□□ 1.11
STAG1Q8WVM7 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
STAG1Q8WVM7 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
STAG1Q8WVM7 AC112777.1-201ENST00000540175 1423 ntBASIC21.96■■□□□ 1.11
STAG1Q8WVM7 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC21.96■■□□□ 1.11
STAG1Q8WVM7 MED25-212ENST00000618715 1467 ntTSL 5 BASIC21.96■■□□□ 1.11
STAG1Q8WVM7 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
STAG1Q8WVM7 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
STAG1Q8WVM7 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
STAG1Q8WVM7 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
STAG1Q8WVM7 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
STAG1Q8WVM7 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC21.95■■□□□ 1.1
STAG1Q8WVM7 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
STAG1Q8WVM7 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
STAG1Q8WVM7 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
STAG1Q8WVM7 COPE-203ENST00000351079 907 ntTSL 2 BASIC21.95■■□□□ 1.1
STAG1Q8WVM7 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
STAG1Q8WVM7 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
STAG1Q8WVM7 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
STAG1Q8WVM7 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC21.95■■□□□ 1.1
STAG1Q8WVM7 HOMER2P1-201ENST00000455653 964 ntBASIC21.95■■□□□ 1.1
STAG1Q8WVM7 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms