Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
U2AF1L4Q8WU68 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
U2AF1L4Q8WU68 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
U2AF1L4Q8WU68 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC21.34■■□□□ 1.01
U2AF1L4Q8WU68 MIR574-201ENST00000385209 96 ntBASIC21.34■■□□□ 1.01
U2AF1L4Q8WU68 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
U2AF1L4Q8WU68 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC21.34■■□□□ 1.01
U2AF1L4Q8WU68 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
U2AF1L4Q8WU68 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
U2AF1L4Q8WU68 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
U2AF1L4Q8WU68 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
U2AF1L4Q8WU68 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
U2AF1L4Q8WU68 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
U2AF1L4Q8WU68 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
U2AF1L4Q8WU68 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
U2AF1L4Q8WU68 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
U2AF1L4Q8WU68 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
U2AF1L4Q8WU68 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
U2AF1L4Q8WU68 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
U2AF1L4Q8WU68 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
U2AF1L4Q8WU68 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC21.33■■□□□ 1.01
U2AF1L4Q8WU68 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
U2AF1L4Q8WU68 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
U2AF1L4Q8WU68 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC21.33■■□□□ 1.01
U2AF1L4Q8WU68 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
U2AF1L4Q8WU68 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
U2AF1L4Q8WU68 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
U2AF1L4Q8WU68 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
U2AF1L4Q8WU68 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC21.33■■□□□ 1.01
U2AF1L4Q8WU68 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
U2AF1L4Q8WU68 TSPY12P-201ENST00000421279 868 ntBASIC21.33■■□□□ 1.01
U2AF1L4Q8WU68 HLA-F-220ENST00000434407 884 ntBASIC21.33■■□□□ 1.01
U2AF1L4Q8WU68 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC21.33■■□□□ 1.01
U2AF1L4Q8WU68 TPM1-218ENST00000559281 851 ntTSL 5 BASIC21.33■■□□□ 1.01
U2AF1L4Q8WU68 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
U2AF1L4Q8WU68 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
U2AF1L4Q8WU68 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
U2AF1L4Q8WU68 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.32■■□□□ 1
U2AF1L4Q8WU68 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
U2AF1L4Q8WU68 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
U2AF1L4Q8WU68 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
U2AF1L4Q8WU68 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC21.32■■□□□ 1
U2AF1L4Q8WU68 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.32■■□□□ 1
U2AF1L4Q8WU68 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
U2AF1L4Q8WU68 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC21.32■■□□□ 1
U2AF1L4Q8WU68 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC21.32■■□□□ 1
U2AF1L4Q8WU68 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
U2AF1L4Q8WU68 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.32■■□□□ 1
U2AF1L4Q8WU68 DFFB-203ENST00000341385 572 ntTSL 5 BASIC21.32■■□□□ 1
U2AF1L4Q8WU68 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC21.32■■□□□ 1
U2AF1L4Q8WU68 MIR662-201ENST00000384847 95 ntBASIC21.32■■□□□ 1
U2AF1L4Q8WU68 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC21.32■■□□□ 1
U2AF1L4Q8WU68 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.32■■□□□ 1
U2AF1L4Q8WU68 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC21.32■■□□□ 1
U2AF1L4Q8WU68 AC092183.1-201ENST00000469884 875 ntBASIC21.32■■□□□ 1
U2AF1L4Q8WU68 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC21.32■■□□□ 1
U2AF1L4Q8WU68 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
U2AF1L4Q8WU68 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC21.32■■□□□ 1
U2AF1L4Q8WU68 AL353801.3-201ENST00000609898 542 ntBASIC21.32■■□□□ 1
U2AF1L4Q8WU68 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
U2AF1L4Q8WU68 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC21.32■■□□□ 1
U2AF1L4Q8WU68 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
U2AF1L4Q8WU68 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
U2AF1L4Q8WU68 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
U2AF1L4Q8WU68 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
U2AF1L4Q8WU68 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
U2AF1L4Q8WU68 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC21.31■■□□□ 1
U2AF1L4Q8WU68 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
U2AF1L4Q8WU68 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.31■■□□□ 1
U2AF1L4Q8WU68 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.31■■□□□ 1
U2AF1L4Q8WU68 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.31■■□□□ 1
U2AF1L4Q8WU68 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.31■■□□□ 1
U2AF1L4Q8WU68 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.31■■□□□ 1
U2AF1L4Q8WU68 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
U2AF1L4Q8WU68 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC21.31■■□□□ 1
U2AF1L4Q8WU68 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
U2AF1L4Q8WU68 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC21.31■■□□□ 1
U2AF1L4Q8WU68 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC21.31■■□□□ 1
U2AF1L4Q8WU68 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
U2AF1L4Q8WU68 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC21.31■■□□□ 1
U2AF1L4Q8WU68 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21.31■■□□□ 1
U2AF1L4Q8WU68 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
U2AF1L4Q8WU68 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
U2AF1L4Q8WU68 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.31■■□□□ 1
U2AF1L4Q8WU68 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
U2AF1L4Q8WU68 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
U2AF1L4Q8WU68 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
U2AF1L4Q8WU68 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
U2AF1L4Q8WU68 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC21.31■■□□□ 1
U2AF1L4Q8WU68 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
U2AF1L4Q8WU68 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
U2AF1L4Q8WU68 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
U2AF1L4Q8WU68 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
U2AF1L4Q8WU68 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
U2AF1L4Q8WU68 AC104819.1-201ENST00000504587 486 ntBASIC21.3■■□□□ 1
U2AF1L4Q8WU68 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC21.3■■□□□ 1
U2AF1L4Q8WU68 AC138894.3-201ENST00000603787 634 ntBASIC21.3■■□□□ 1
U2AF1L4Q8WU68 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC21.3■■□□□ 1
U2AF1L4Q8WU68 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
U2AF1L4Q8WU68 AP001271.2-201ENST00000624018 1556 ntBASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms