Protein–RNA interactions for Protein: Q8NBN7

RDH13, Retinol dehydrogenase 13, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13Q8NBN7 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RDH13Q8NBN7 Z98044.1-201ENST00000632503 1764 ntBASIC20.44■□□□□ 0.86
RDH13Q8NBN7 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RDH13Q8NBN7 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
RDH13Q8NBN7 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RDH13Q8NBN7 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RDH13Q8NBN7 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.43■□□□□ 0.86
RDH13Q8NBN7 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RDH13Q8NBN7 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
RDH13Q8NBN7 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
RDH13Q8NBN7 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RDH13Q8NBN7 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RDH13Q8NBN7 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RDH13Q8NBN7 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
RDH13Q8NBN7 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC20.43■□□□□ 0.86
RDH13Q8NBN7 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RDH13Q8NBN7 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RDH13Q8NBN7 MCCD1P1-208ENST00000445732 328 ntBASIC20.43■□□□□ 0.86
RDH13Q8NBN7 AC128688.1-201ENST00000487626 519 ntBASIC20.43■□□□□ 0.86
RDH13Q8NBN7 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
RDH13Q8NBN7 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.43■□□□□ 0.86
RDH13Q8NBN7 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.43■□□□□ 0.86
RDH13Q8NBN7 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
RDH13Q8NBN7 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RDH13Q8NBN7 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.43■□□□□ 0.86
RDH13Q8NBN7 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
RDH13Q8NBN7 AC093525.10-201ENST00000625130 1569 ntBASIC20.42■□□□□ 0.86
RDH13Q8NBN7 AC104581.1-202ENST00000635932 2618 ntBASIC20.42■□□□□ 0.86
RDH13Q8NBN7 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RDH13Q8NBN7 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.42■□□□□ 0.86
RDH13Q8NBN7 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.42■□□□□ 0.86
RDH13Q8NBN7 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RDH13Q8NBN7 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.42■□□□□ 0.86
RDH13Q8NBN7 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RDH13Q8NBN7 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
RDH13Q8NBN7 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RDH13Q8NBN7 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RDH13Q8NBN7 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RDH13Q8NBN7 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.42■□□□□ 0.86
RDH13Q8NBN7 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RDH13Q8NBN7 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RDH13Q8NBN7 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.42■□□□□ 0.86
RDH13Q8NBN7 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RDH13Q8NBN7 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RDH13Q8NBN7 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
RDH13Q8NBN7 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
RDH13Q8NBN7 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RDH13Q8NBN7 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RDH13Q8NBN7 AL109659.2-201ENST00000606809 1674 ntBASIC20.42■□□□□ 0.86
RDH13Q8NBN7 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
RDH13Q8NBN7 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
RDH13Q8NBN7 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
RDH13Q8NBN7 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.41■□□□□ 0.86
RDH13Q8NBN7 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
RDH13Q8NBN7 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RDH13Q8NBN7 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RDH13Q8NBN7 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.41■□□□□ 0.86
RDH13Q8NBN7 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.41■□□□□ 0.86
RDH13Q8NBN7 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.41■□□□□ 0.86
RDH13Q8NBN7 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.41■□□□□ 0.86
RDH13Q8NBN7 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RDH13Q8NBN7 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
RDH13Q8NBN7 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.41■□□□□ 0.86
RDH13Q8NBN7 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
RDH13Q8NBN7 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.41■□□□□ 0.86
RDH13Q8NBN7 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
RDH13Q8NBN7 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
RDH13Q8NBN7 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RDH13Q8NBN7 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.41■□□□□ 0.86
RDH13Q8NBN7 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.41■□□□□ 0.86
RDH13Q8NBN7 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
RDH13Q8NBN7 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
RDH13Q8NBN7 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
RDH13Q8NBN7 WIZP1-201ENST00000531444 2299 ntBASIC20.41■□□□□ 0.86
RDH13Q8NBN7 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RDH13Q8NBN7 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
RDH13Q8NBN7 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RDH13Q8NBN7 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RDH13Q8NBN7 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RDH13Q8NBN7 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RDH13Q8NBN7 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RDH13Q8NBN7 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RDH13Q8NBN7 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.4■□□□□ 0.86
RDH13Q8NBN7 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.4■□□□□ 0.86
RDH13Q8NBN7 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.4■□□□□ 0.86
RDH13Q8NBN7 AC211429.1-201ENST00000415277 523 ntBASIC20.4■□□□□ 0.86
RDH13Q8NBN7 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RDH13Q8NBN7 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.4■□□□□ 0.86
RDH13Q8NBN7 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
RDH13Q8NBN7 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RDH13Q8NBN7 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RDH13Q8NBN7 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
RDH13Q8NBN7 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.4■□□□□ 0.86
RDH13Q8NBN7 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.4■□□□□ 0.86
RDH13Q8NBN7 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.4■□□□□ 0.86
RDH13Q8NBN7 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RDH13Q8NBN7 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RDH13Q8NBN7 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RDH13Q8NBN7 RNF165-205ENST00000588679 2904 ntBASIC20.4■□□□□ 0.86
RDH13Q8NBN7 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms