Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CPSF7Q8N684 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.28■□□□□ 0.52
CPSF7Q8N684 AC110285.5-201ENST00000611501 352 ntBASIC18.28■□□□□ 0.52
CPSF7Q8N684 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CPSF7Q8N684 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.28■□□□□ 0.52
CPSF7Q8N684 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CPSF7Q8N684 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CPSF7Q8N684 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CPSF7Q8N684 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CPSF7Q8N684 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CPSF7Q8N684 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.28■□□□□ 0.52
CPSF7Q8N684 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CPSF7Q8N684 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CPSF7Q8N684 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CPSF7Q8N684 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
CPSF7Q8N684 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CPSF7Q8N684 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CPSF7Q8N684 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CPSF7Q8N684 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CPSF7Q8N684 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.27■□□□□ 0.52
CPSF7Q8N684 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CPSF7Q8N684 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.27■□□□□ 0.52
CPSF7Q8N684 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CPSF7Q8N684 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CPSF7Q8N684 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.27■□□□□ 0.52
CPSF7Q8N684 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
CPSF7Q8N684 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CPSF7Q8N684 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CPSF7Q8N684 PRKY-204ENST00000533551 1019 ntBASIC18.27■□□□□ 0.52
CPSF7Q8N684 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.27■□□□□ 0.52
CPSF7Q8N684 AL121906.2-201ENST00000621597 723 ntBASIC18.27■□□□□ 0.52
CPSF7Q8N684 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CPSF7Q8N684 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CPSF7Q8N684 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
CPSF7Q8N684 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.27■□□□□ 0.52
CPSF7Q8N684 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CPSF7Q8N684 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.27■□□□□ 0.51
CPSF7Q8N684 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CPSF7Q8N684 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CPSF7Q8N684 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.27■□□□□ 0.51
CPSF7Q8N684 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CPSF7Q8N684 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.26■□□□□ 0.51
CPSF7Q8N684 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CPSF7Q8N684 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.26■□□□□ 0.51
CPSF7Q8N684 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.26■□□□□ 0.51
CPSF7Q8N684 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CPSF7Q8N684 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CPSF7Q8N684 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CPSF7Q8N684 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CPSF7Q8N684 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CPSF7Q8N684 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.26■□□□□ 0.51
CPSF7Q8N684 TUBB8P6-201ENST00000436895 1288 ntBASIC18.26■□□□□ 0.51
CPSF7Q8N684 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.26■□□□□ 0.51
CPSF7Q8N684 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.26■□□□□ 0.51
CPSF7Q8N684 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CPSF7Q8N684 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.26■□□□□ 0.51
CPSF7Q8N684 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CPSF7Q8N684 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CPSF7Q8N684 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
CPSF7Q8N684 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CPSF7Q8N684 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CPSF7Q8N684 HCG11-201ENST00000411553 5696 ntBASIC18.26■□□□□ 0.51
CPSF7Q8N684 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.26■□□□□ 0.51
CPSF7Q8N684 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CPSF7Q8N684 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.26■□□□□ 0.51
CPSF7Q8N684 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.26■□□□□ 0.51
CPSF7Q8N684 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CPSF7Q8N684 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.25■□□□□ 0.51
CPSF7Q8N684 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.25■□□□□ 0.51
CPSF7Q8N684 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CPSF7Q8N684 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.25■□□□□ 0.51
CPSF7Q8N684 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CPSF7Q8N684 ESPNP-201ENST00000270691 2015 ntBASIC18.25■□□□□ 0.51
CPSF7Q8N684 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CPSF7Q8N684 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CPSF7Q8N684 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CPSF7Q8N684 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CPSF7Q8N684 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CPSF7Q8N684 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.25■□□□□ 0.51
CPSF7Q8N684 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.25■□□□□ 0.51
CPSF7Q8N684 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CPSF7Q8N684 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CPSF7Q8N684 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CPSF7Q8N684 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CPSF7Q8N684 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.25■□□□□ 0.51
CPSF7Q8N684 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CPSF7Q8N684 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CPSF7Q8N684 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CPSF7Q8N684 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CPSF7Q8N684 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.25■□□□□ 0.51
CPSF7Q8N684 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CPSF7Q8N684 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.25■□□□□ 0.51
CPSF7Q8N684 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.25■□□□□ 0.51
CPSF7Q8N684 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.25■□□□□ 0.51
CPSF7Q8N684 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CPSF7Q8N684 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CPSF7Q8N684 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.25■□□□□ 0.51
CPSF7Q8N684 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.25■□□□□ 0.51
CPSF7Q8N684 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CPSF7Q8N684 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms