Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC15.14■□□□□ 0.01
LINC00311Q8N616 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00311Q8N616 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00311Q8N616 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00311Q8N616 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00311Q8N616 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00311Q8N616 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00311Q8N616 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00311Q8N616 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC15.14■□□□□ 0.01
LINC00311Q8N616 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC00311Q8N616 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
LINC00311Q8N616 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00311Q8N616 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC15.13■□□□□ 0.01
LINC00311Q8N616 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00311Q8N616 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
LINC00311Q8N616 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00311Q8N616 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00311Q8N616 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC15.13■□□□□ 0.01
LINC00311Q8N616 AC126763.1-201ENST00000552015 2118 ntBASIC15.13■□□□□ 0.01
LINC00311Q8N616 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
LINC00311Q8N616 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00311Q8N616 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00311Q8N616 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00311Q8N616 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00311Q8N616 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00311Q8N616 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
LINC00311Q8N616 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00311Q8N616 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC15.13■□□□□ 0.01
LINC00311Q8N616 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00311Q8N616 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC15.13■□□□□ 0.01
LINC00311Q8N616 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00311Q8N616 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00311Q8N616 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC15.13■□□□□ 0.01
LINC00311Q8N616 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00311Q8N616 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00311Q8N616 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC15.13■□□□□ 0.01
LINC00311Q8N616 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC15.13■□□□□ 0.01
LINC00311Q8N616 KRT8P50-201ENST00000562022 1438 ntBASIC15.13■□□□□ 0.01
LINC00311Q8N616 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
LINC00311Q8N616 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC15.13■□□□□ 0.01
LINC00311Q8N616 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
LINC00311Q8N616 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00311Q8N616 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC15.13■□□□□ 0.01
LINC00311Q8N616 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00311Q8N616 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00311Q8N616 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00311Q8N616 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00311Q8N616 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00311Q8N616 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LINC00311Q8N616 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC15.13■□□□□ 0.01
LINC00311Q8N616 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC15.13■□□□□ 0.01
LINC00311Q8N616 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC15.12■□□□□ 0.01
LINC00311Q8N616 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
LINC00311Q8N616 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00311Q8N616 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC15.12■□□□□ 0.01
LINC00311Q8N616 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00311Q8N616 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00311Q8N616 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00311Q8N616 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00311Q8N616 AL162741.1-201ENST00000565563 1558 ntBASIC15.12■□□□□ 0.01
LINC00311Q8N616 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00311Q8N616 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
LINC00311Q8N616 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00311Q8N616 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
LINC00311Q8N616 HMGA1P5-201ENST00000412453 271 ntBASIC15.12■□□□□ 0.01
LINC00311Q8N616 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00311Q8N616 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00311Q8N616 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC15.12■□□□□ 0.01
LINC00311Q8N616 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC15.12■□□□□ 0.01
LINC00311Q8N616 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC15.12■□□□□ 0.01
LINC00311Q8N616 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC15.12■□□□□ 0.01
LINC00311Q8N616 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC15.12■□□□□ 0.01
LINC00311Q8N616 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00311Q8N616 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00311Q8N616 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC15.12■□□□□ 0.01
LINC00311Q8N616 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00311Q8N616 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC15.12■□□□□ 0.01
LINC00311Q8N616 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00311Q8N616 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00311Q8N616 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC15.12■□□□□ 0.01
LINC00311Q8N616 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
LINC00311Q8N616 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00311Q8N616 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
LINC00311Q8N616 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
LINC00311Q8N616 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
LINC00311Q8N616 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00311Q8N616 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
LINC00311Q8N616 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00311Q8N616 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC15.11■□□□□ 0.01
LINC00311Q8N616 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00311Q8N616 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00311Q8N616 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00311Q8N616 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
LINC00311Q8N616 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00311Q8N616 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00311Q8N616 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00311Q8N616 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC15.11■□□□□ 0.01
LINC00311Q8N616 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC15.11■□□□□ 0.01
LINC00311Q8N616 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC15.11■□□□□ 0.01
LINC00311Q8N616 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms