Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CCDC33Q8N5R6 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC33Q8N5R6 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC33Q8N5R6 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.59■□□□□ 0.73
CCDC33Q8N5R6 FAM8A6P-201ENST00000407496 1135 ntBASIC19.59■□□□□ 0.73
CCDC33Q8N5R6 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.59■□□□□ 0.73
CCDC33Q8N5R6 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC33Q8N5R6 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC33Q8N5R6 AC011558.1-201ENST00000623459 338 ntBASIC19.59■□□□□ 0.73
CCDC33Q8N5R6 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC33Q8N5R6 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CCDC33Q8N5R6 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC33Q8N5R6 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC33Q8N5R6 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC33Q8N5R6 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CCDC33Q8N5R6 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CCDC33Q8N5R6 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC33Q8N5R6 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC33Q8N5R6 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.73
CCDC33Q8N5R6 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.58■□□□□ 0.73
CCDC33Q8N5R6 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
CCDC33Q8N5R6 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC33Q8N5R6 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC33Q8N5R6 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC33Q8N5R6 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC33Q8N5R6 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC33Q8N5R6 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC33Q8N5R6 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.58■□□□□ 0.72
CCDC33Q8N5R6 AL031133.1-201ENST00000406807 723 ntBASIC19.58■□□□□ 0.72
CCDC33Q8N5R6 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.58■□□□□ 0.72
CCDC33Q8N5R6 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.58■□□□□ 0.72
CCDC33Q8N5R6 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.58■□□□□ 0.72
CCDC33Q8N5R6 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC33Q8N5R6 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.58■□□□□ 0.72
CCDC33Q8N5R6 AL353719.1-201ENST00000566847 864 ntBASIC19.58■□□□□ 0.72
CCDC33Q8N5R6 AC091076.1-201ENST00000610741 619 ntBASIC19.58■□□□□ 0.72
CCDC33Q8N5R6 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.72
CCDC33Q8N5R6 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC33Q8N5R6 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.58■□□□□ 0.72
CCDC33Q8N5R6 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CCDC33Q8N5R6 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC33Q8N5R6 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CCDC33Q8N5R6 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC33Q8N5R6 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC33Q8N5R6 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CCDC33Q8N5R6 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC33Q8N5R6 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC33Q8N5R6 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC33Q8N5R6 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC33Q8N5R6 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC33Q8N5R6 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC33Q8N5R6 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC33Q8N5R6 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CCDC33Q8N5R6 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC33Q8N5R6 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC33Q8N5R6 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC33Q8N5R6 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC33Q8N5R6 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC33Q8N5R6 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC33Q8N5R6 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC33Q8N5R6 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC33Q8N5R6 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC33Q8N5R6 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CCDC33Q8N5R6 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC33Q8N5R6 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.57■□□□□ 0.72
CCDC33Q8N5R6 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC33Q8N5R6 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC33Q8N5R6 MYC-208ENST00000641036 567 ntBASIC19.57■□□□□ 0.72
CCDC33Q8N5R6 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC33Q8N5R6 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC33Q8N5R6 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC33Q8N5R6 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC33Q8N5R6 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC33Q8N5R6 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC33Q8N5R6 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC33Q8N5R6 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC33Q8N5R6 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC33Q8N5R6 CROCCP3-202ENST00000420820 1947 ntBASIC19.57■□□□□ 0.72
CCDC33Q8N5R6 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
CCDC33Q8N5R6 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC33Q8N5R6 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC33Q8N5R6 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC33Q8N5R6 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC33Q8N5R6 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC33Q8N5R6 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC33Q8N5R6 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC33Q8N5R6 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC33Q8N5R6 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC33Q8N5R6 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC33Q8N5R6 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.56■□□□□ 0.72
CCDC33Q8N5R6 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC33Q8N5R6 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC33Q8N5R6 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC33Q8N5R6 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC33Q8N5R6 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC33Q8N5R6 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC33Q8N5R6 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC33Q8N5R6 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC33Q8N5R6 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CCDC33Q8N5R6 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms