Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPNE9Q8IYJ1 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CPNE9Q8IYJ1 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPNE9Q8IYJ1 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.5■□□□□ 0.55
CPNE9Q8IYJ1 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPNE9Q8IYJ1 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CPNE9Q8IYJ1 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPNE9Q8IYJ1 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.49■□□□□ 0.55
CPNE9Q8IYJ1 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CPNE9Q8IYJ1 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.49■□□□□ 0.55
CPNE9Q8IYJ1 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.49■□□□□ 0.55
CPNE9Q8IYJ1 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.49■□□□□ 0.55
CPNE9Q8IYJ1 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CPNE9Q8IYJ1 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CPNE9Q8IYJ1 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CPNE9Q8IYJ1 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CPNE9Q8IYJ1 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
CPNE9Q8IYJ1 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CPNE9Q8IYJ1 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.49■□□□□ 0.55
CPNE9Q8IYJ1 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.49■□□□□ 0.55
CPNE9Q8IYJ1 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CPNE9Q8IYJ1 CRYGFP-201ENST00000418459 633 ntBASIC18.49■□□□□ 0.55
CPNE9Q8IYJ1 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.49■□□□□ 0.55
CPNE9Q8IYJ1 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.49■□□□□ 0.55
CPNE9Q8IYJ1 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.49■□□□□ 0.55
CPNE9Q8IYJ1 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.49■□□□□ 0.55
CPNE9Q8IYJ1 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.49■□□□□ 0.55
CPNE9Q8IYJ1 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.49■□□□□ 0.55
CPNE9Q8IYJ1 AP006294.2-201ENST00000641667 209 ntBASIC18.49■□□□□ 0.55
CPNE9Q8IYJ1 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CPNE9Q8IYJ1 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.49■□□□□ 0.55
CPNE9Q8IYJ1 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CPNE9Q8IYJ1 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.49■□□□□ 0.55
CPNE9Q8IYJ1 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.49■□□□□ 0.55
CPNE9Q8IYJ1 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CPNE9Q8IYJ1 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CPNE9Q8IYJ1 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CPNE9Q8IYJ1 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
CPNE9Q8IYJ1 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CPNE9Q8IYJ1 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CPNE9Q8IYJ1 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CPNE9Q8IYJ1 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPNE9Q8IYJ1 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPNE9Q8IYJ1 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPNE9Q8IYJ1 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPNE9Q8IYJ1 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPNE9Q8IYJ1 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.48■□□□□ 0.55
CPNE9Q8IYJ1 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.48■□□□□ 0.55
CPNE9Q8IYJ1 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPNE9Q8IYJ1 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CPNE9Q8IYJ1 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CPNE9Q8IYJ1 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
CPNE9Q8IYJ1 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.48■□□□□ 0.55
CPNE9Q8IYJ1 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.48■□□□□ 0.55
CPNE9Q8IYJ1 SNORA78-201ENST00000459373 127 ntBASIC18.48■□□□□ 0.55
CPNE9Q8IYJ1 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.48■□□□□ 0.55
CPNE9Q8IYJ1 AC008622.2-201ENST00000617006 1229 ntBASIC18.48■□□□□ 0.55
CPNE9Q8IYJ1 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
CPNE9Q8IYJ1 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPNE9Q8IYJ1 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.48■□□□□ 0.55
CPNE9Q8IYJ1 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
CPNE9Q8IYJ1 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPNE9Q8IYJ1 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CPNE9Q8IYJ1 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.48■□□□□ 0.55
CPNE9Q8IYJ1 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPNE9Q8IYJ1 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CPNE9Q8IYJ1 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CPNE9Q8IYJ1 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPNE9Q8IYJ1 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.48■□□□□ 0.55
CPNE9Q8IYJ1 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.47■□□□□ 0.55
CPNE9Q8IYJ1 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CPNE9Q8IYJ1 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CPNE9Q8IYJ1 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPNE9Q8IYJ1 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPNE9Q8IYJ1 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.47■□□□□ 0.55
CPNE9Q8IYJ1 AL499627.1-201ENST00000569373 2188 ntBASIC18.47■□□□□ 0.55
CPNE9Q8IYJ1 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPNE9Q8IYJ1 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPNE9Q8IYJ1 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.47■□□□□ 0.55
CPNE9Q8IYJ1 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.47■□□□□ 0.55
CPNE9Q8IYJ1 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.47■□□□□ 0.55
CPNE9Q8IYJ1 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.47■□□□□ 0.55
CPNE9Q8IYJ1 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.47■□□□□ 0.55
CPNE9Q8IYJ1 MIR4785-201ENST00000585005 73 ntBASIC18.47■□□□□ 0.55
CPNE9Q8IYJ1 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CPNE9Q8IYJ1 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.47■□□□□ 0.55
CPNE9Q8IYJ1 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPNE9Q8IYJ1 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPNE9Q8IYJ1 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.47■□□□□ 0.55
CPNE9Q8IYJ1 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPNE9Q8IYJ1 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.47■□□□□ 0.55
CPNE9Q8IYJ1 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.47■□□□□ 0.55
CPNE9Q8IYJ1 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPNE9Q8IYJ1 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPNE9Q8IYJ1 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPNE9Q8IYJ1 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
CPNE9Q8IYJ1 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.47■□□□□ 0.55
CPNE9Q8IYJ1 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPNE9Q8IYJ1 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CPNE9Q8IYJ1 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms