Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.73■□□□□ 0.75
CCDC50Q8IVM0 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
CCDC50Q8IVM0 AC006058.3-201ENST00000606217 1069 ntBASIC19.73■□□□□ 0.75
CCDC50Q8IVM0 AC110285.5-201ENST00000611501 352 ntBASIC19.73■□□□□ 0.75
CCDC50Q8IVM0 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.73■□□□□ 0.75
CCDC50Q8IVM0 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC50Q8IVM0 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CCDC50Q8IVM0 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC50Q8IVM0 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CCDC50Q8IVM0 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC50Q8IVM0 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC50Q8IVM0 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC50Q8IVM0 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC50Q8IVM0 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC50Q8IVM0 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC50Q8IVM0 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC50Q8IVM0 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC50Q8IVM0 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC50Q8IVM0 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
CCDC50Q8IVM0 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC50Q8IVM0 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC50Q8IVM0 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC50Q8IVM0 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC50Q8IVM0 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC50Q8IVM0 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC50Q8IVM0 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
CCDC50Q8IVM0 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC50Q8IVM0 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC50Q8IVM0 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.72■□□□□ 0.75
CCDC50Q8IVM0 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC50Q8IVM0 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CCDC50Q8IVM0 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC50Q8IVM0 AC073648.6-201ENST00000641589 218 ntBASIC19.72■□□□□ 0.75
CCDC50Q8IVM0 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC50Q8IVM0 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC50Q8IVM0 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC50Q8IVM0 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC50Q8IVM0 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC50Q8IVM0 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC50Q8IVM0 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC50Q8IVM0 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC50Q8IVM0 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC50Q8IVM0 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC50Q8IVM0 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC50Q8IVM0 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC50Q8IVM0 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC50Q8IVM0 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
CCDC50Q8IVM0 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC50Q8IVM0 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC50Q8IVM0 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC50Q8IVM0 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC50Q8IVM0 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC50Q8IVM0 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC50Q8IVM0 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC50Q8IVM0 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC50Q8IVM0 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.71■□□□□ 0.75
CCDC50Q8IVM0 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC50Q8IVM0 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC50Q8IVM0 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC50Q8IVM0 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC50Q8IVM0 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC50Q8IVM0 RN7SL471P-201ENST00000580476 299 ntBASIC19.71■□□□□ 0.75
CCDC50Q8IVM0 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CCDC50Q8IVM0 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC50Q8IVM0 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CCDC50Q8IVM0 AC131212.4-201ENST00000623606 975 ntBASIC19.71■□□□□ 0.75
CCDC50Q8IVM0 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC50Q8IVM0 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC50Q8IVM0 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC50Q8IVM0 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC50Q8IVM0 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC50Q8IVM0 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.71■□□□□ 0.75
CCDC50Q8IVM0 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC50Q8IVM0 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC50Q8IVM0 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC50Q8IVM0 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC50Q8IVM0 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CCDC50Q8IVM0 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC50Q8IVM0 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC50Q8IVM0 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC50Q8IVM0 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC50Q8IVM0 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC50Q8IVM0 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC50Q8IVM0 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC50Q8IVM0 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CCDC50Q8IVM0 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CCDC50Q8IVM0 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC50Q8IVM0 AC133681.1-201ENST00000465482 601 ntBASIC19.7■□□□□ 0.74
CCDC50Q8IVM0 AP002982.1-201ENST00000492365 877 ntBASIC19.7■□□□□ 0.74
CCDC50Q8IVM0 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC50Q8IVM0 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC50Q8IVM0 AL445675.2-201ENST00000620291 557 ntBASIC19.7■□□□□ 0.74
CCDC50Q8IVM0 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC50Q8IVM0 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC50Q8IVM0 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC50Q8IVM0 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC50Q8IVM0 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC50Q8IVM0 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC50Q8IVM0 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC50Q8IVM0 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms