Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CDHR3Q6ZTQ4 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CDHR3Q6ZTQ4 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.77■□□□□ 0.6
CDHR3Q6ZTQ4 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CDHR3Q6ZTQ4 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.77■□□□□ 0.6
CDHR3Q6ZTQ4 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.77■□□□□ 0.6
CDHR3Q6ZTQ4 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDHR3Q6ZTQ4 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDHR3Q6ZTQ4 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CDHR3Q6ZTQ4 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.77■□□□□ 0.6
CDHR3Q6ZTQ4 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.77■□□□□ 0.6
CDHR3Q6ZTQ4 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.77■□□□□ 0.6
CDHR3Q6ZTQ4 C1QL1P1-201ENST00000568105 661 ntBASIC18.77■□□□□ 0.6
CDHR3Q6ZTQ4 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.77■□□□□ 0.6
CDHR3Q6ZTQ4 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDHR3Q6ZTQ4 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDHR3Q6ZTQ4 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.77■□□□□ 0.6
CDHR3Q6ZTQ4 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDHR3Q6ZTQ4 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CDHR3Q6ZTQ4 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CDHR3Q6ZTQ4 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDHR3Q6ZTQ4 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDHR3Q6ZTQ4 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDHR3Q6ZTQ4 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.76■□□□□ 0.59
CDHR3Q6ZTQ4 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDHR3Q6ZTQ4 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDHR3Q6ZTQ4 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CDHR3Q6ZTQ4 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDHR3Q6ZTQ4 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CDHR3Q6ZTQ4 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDHR3Q6ZTQ4 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDHR3Q6ZTQ4 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.76■□□□□ 0.59
CDHR3Q6ZTQ4 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.76■□□□□ 0.59
CDHR3Q6ZTQ4 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
CDHR3Q6ZTQ4 AC026471.5-201ENST00000615068 467 ntBASIC18.76■□□□□ 0.59
CDHR3Q6ZTQ4 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.76■□□□□ 0.59
CDHR3Q6ZTQ4 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.76■□□□□ 0.59
CDHR3Q6ZTQ4 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDHR3Q6ZTQ4 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CDHR3Q6ZTQ4 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDHR3Q6ZTQ4 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDHR3Q6ZTQ4 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDHR3Q6ZTQ4 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.76■□□□□ 0.59
CDHR3Q6ZTQ4 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.76■□□□□ 0.59
CDHR3Q6ZTQ4 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDHR3Q6ZTQ4 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.76■□□□□ 0.59
CDHR3Q6ZTQ4 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDHR3Q6ZTQ4 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDHR3Q6ZTQ4 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.75■□□□□ 0.59
CDHR3Q6ZTQ4 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDHR3Q6ZTQ4 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.75■□□□□ 0.59
CDHR3Q6ZTQ4 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDHR3Q6ZTQ4 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDHR3Q6ZTQ4 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.75■□□□□ 0.59
CDHR3Q6ZTQ4 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDHR3Q6ZTQ4 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.75■□□□□ 0.59
CDHR3Q6ZTQ4 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
CDHR3Q6ZTQ4 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDHR3Q6ZTQ4 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CDHR3Q6ZTQ4 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDHR3Q6ZTQ4 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.75■□□□□ 0.59
CDHR3Q6ZTQ4 NIFKP9-201ENST00000419265 221 ntBASIC18.75■□□□□ 0.59
CDHR3Q6ZTQ4 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDHR3Q6ZTQ4 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDHR3Q6ZTQ4 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDHR3Q6ZTQ4 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.75■□□□□ 0.59
CDHR3Q6ZTQ4 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDHR3Q6ZTQ4 AL160286.2-201ENST00000567150 934 ntBASIC18.75■□□□□ 0.59
CDHR3Q6ZTQ4 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.75■□□□□ 0.59
CDHR3Q6ZTQ4 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.75■□□□□ 0.59
CDHR3Q6ZTQ4 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDHR3Q6ZTQ4 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.75■□□□□ 0.59
CDHR3Q6ZTQ4 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.75■□□□□ 0.59
CDHR3Q6ZTQ4 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDHR3Q6ZTQ4 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDHR3Q6ZTQ4 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.75■□□□□ 0.59
CDHR3Q6ZTQ4 HEIH-201ENST00000623091 1652 ntBASIC18.75■□□□□ 0.59
CDHR3Q6ZTQ4 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDHR3Q6ZTQ4 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDHR3Q6ZTQ4 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.75■□□□□ 0.59
CDHR3Q6ZTQ4 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDHR3Q6ZTQ4 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDHR3Q6ZTQ4 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDHR3Q6ZTQ4 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDHR3Q6ZTQ4 FZD10-202ENST00000539839 3282 ntBASIC18.74■□□□□ 0.59
CDHR3Q6ZTQ4 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CDHR3Q6ZTQ4 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CDHR3Q6ZTQ4 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDHR3Q6ZTQ4 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CDHR3Q6ZTQ4 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.74■□□□□ 0.59
CDHR3Q6ZTQ4 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.74■□□□□ 0.59
CDHR3Q6ZTQ4 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDHR3Q6ZTQ4 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDHR3Q6ZTQ4 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.74■□□□□ 0.59
CDHR3Q6ZTQ4 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.74■□□□□ 0.59
CDHR3Q6ZTQ4 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.74■□□□□ 0.59
CDHR3Q6ZTQ4 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.74■□□□□ 0.59
CDHR3Q6ZTQ4 TSPY15P-201ENST00000457163 923 ntBASIC18.74■□□□□ 0.59
CDHR3Q6ZTQ4 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDHR3Q6ZTQ4 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms