Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FOXR1Q6PIV2 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
FOXR1Q6PIV2 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
FOXR1Q6PIV2 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FOXR1Q6PIV2 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
FOXR1Q6PIV2 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FOXR1Q6PIV2 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FOXR1Q6PIV2 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
FOXR1Q6PIV2 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
FOXR1Q6PIV2 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FOXR1Q6PIV2 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC19.47■□□□□ 0.71
FOXR1Q6PIV2 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FOXR1Q6PIV2 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
FOXR1Q6PIV2 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.47■□□□□ 0.71
FOXR1Q6PIV2 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.47■□□□□ 0.71
FOXR1Q6PIV2 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
FOXR1Q6PIV2 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.47■□□□□ 0.71
FOXR1Q6PIV2 AP001412.1-201ENST00000608405 714 ntBASIC19.47■□□□□ 0.71
FOXR1Q6PIV2 AC133561.5-201ENST00000635547 218 ntBASIC19.47■□□□□ 0.71
FOXR1Q6PIV2 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
FOXR1Q6PIV2 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
FOXR1Q6PIV2 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FOXR1Q6PIV2 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.47■□□□□ 0.71
FOXR1Q6PIV2 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
FOXR1Q6PIV2 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FOXR1Q6PIV2 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FOXR1Q6PIV2 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.47■□□□□ 0.71
FOXR1Q6PIV2 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FOXR1Q6PIV2 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
FOXR1Q6PIV2 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FOXR1Q6PIV2 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC19.47■□□□□ 0.71
FOXR1Q6PIV2 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.47■□□□□ 0.71
FOXR1Q6PIV2 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.47■□□□□ 0.71
FOXR1Q6PIV2 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
FOXR1Q6PIV2 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.47■□□□□ 0.71
FOXR1Q6PIV2 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
FOXR1Q6PIV2 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC19.47■□□□□ 0.71
FOXR1Q6PIV2 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FOXR1Q6PIV2 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
FOXR1Q6PIV2 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
FOXR1Q6PIV2 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
FOXR1Q6PIV2 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
FOXR1Q6PIV2 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.46■□□□□ 0.71
FOXR1Q6PIV2 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
FOXR1Q6PIV2 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.46■□□□□ 0.71
FOXR1Q6PIV2 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
FOXR1Q6PIV2 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
FOXR1Q6PIV2 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
FOXR1Q6PIV2 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
FOXR1Q6PIV2 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
FOXR1Q6PIV2 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
FOXR1Q6PIV2 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
FOXR1Q6PIV2 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
FOXR1Q6PIV2 PGM5P4-201ENST00000421970 445 ntBASIC19.46■□□□□ 0.71
FOXR1Q6PIV2 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.46■□□□□ 0.71
FOXR1Q6PIV2 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.46■□□□□ 0.71
FOXR1Q6PIV2 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.46■□□□□ 0.71
FOXR1Q6PIV2 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
FOXR1Q6PIV2 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.46■□□□□ 0.71
FOXR1Q6PIV2 AC110285.5-201ENST00000611501 352 ntBASIC19.46■□□□□ 0.71
FOXR1Q6PIV2 AL049637.2-201ENST00000641778 930 ntBASIC19.46■□□□□ 0.71
FOXR1Q6PIV2 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.46■□□□□ 0.71
FOXR1Q6PIV2 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
FOXR1Q6PIV2 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
FOXR1Q6PIV2 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
FOXR1Q6PIV2 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
FOXR1Q6PIV2 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.46■□□□□ 0.71
FOXR1Q6PIV2 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
FOXR1Q6PIV2 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
FOXR1Q6PIV2 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
FOXR1Q6PIV2 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
FOXR1Q6PIV2 AC073592.3-201ENST00000625118 1834 ntBASIC19.46■□□□□ 0.71
FOXR1Q6PIV2 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.46■□□□□ 0.71
FOXR1Q6PIV2 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.46■□□□□ 0.71
FOXR1Q6PIV2 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FOXR1Q6PIV2 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FOXR1Q6PIV2 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC19.45■□□□□ 0.7
FOXR1Q6PIV2 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
FOXR1Q6PIV2 AC135776.1-201ENST00000319817 2481 ntBASIC19.45■□□□□ 0.7
FOXR1Q6PIV2 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FOXR1Q6PIV2 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.45■□□□□ 0.7
FOXR1Q6PIV2 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
FOXR1Q6PIV2 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
FOXR1Q6PIV2 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
FOXR1Q6PIV2 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.45■□□□□ 0.7
FOXR1Q6PIV2 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.45■□□□□ 0.7
FOXR1Q6PIV2 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.45■□□□□ 0.7
FOXR1Q6PIV2 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FOXR1Q6PIV2 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.45■□□□□ 0.7
FOXR1Q6PIV2 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.45■□□□□ 0.7
FOXR1Q6PIV2 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC19.45■□□□□ 0.7
FOXR1Q6PIV2 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
FOXR1Q6PIV2 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FOXR1Q6PIV2 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC19.45■□□□□ 0.7
FOXR1Q6PIV2 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.45■□□□□ 0.7
FOXR1Q6PIV2 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FOXR1Q6PIV2 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
FOXR1Q6PIV2 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
FOXR1Q6PIV2 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
FOXR1Q6PIV2 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms