Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
KCNIP4Q6PIL6 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
KCNIP4Q6PIL6 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC14.5□□□□□ -0.09
KCNIP4Q6PIL6 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
KCNIP4Q6PIL6 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
KCNIP4Q6PIL6 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
KCNIP4Q6PIL6 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
KCNIP4Q6PIL6 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
KCNIP4Q6PIL6 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
KCNIP4Q6PIL6 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
KCNIP4Q6PIL6 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
KCNIP4Q6PIL6 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
KCNIP4Q6PIL6 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
KCNIP4Q6PIL6 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
KCNIP4Q6PIL6 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC14.49□□□□□ -0.09
KCNIP4Q6PIL6 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
KCNIP4Q6PIL6 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
KCNIP4Q6PIL6 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
KCNIP4Q6PIL6 NT5C3AP1-201ENST00000394500 1012 ntBASIC14.49□□□□□ -0.09
KCNIP4Q6PIL6 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC14.49□□□□□ -0.09
KCNIP4Q6PIL6 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC14.49□□□□□ -0.09
KCNIP4Q6PIL6 AL031963.3-201ENST00000606441 850 ntBASIC14.49□□□□□ -0.09
KCNIP4Q6PIL6 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
KCNIP4Q6PIL6 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
KCNIP4Q6PIL6 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
KCNIP4Q6PIL6 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
KCNIP4Q6PIL6 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
KCNIP4Q6PIL6 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
KCNIP4Q6PIL6 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.49□□□□□ -0.09
KCNIP4Q6PIL6 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
KCNIP4Q6PIL6 KRT8P20-201ENST00000423953 1409 ntBASIC14.49□□□□□ -0.09
KCNIP4Q6PIL6 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
KCNIP4Q6PIL6 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
KCNIP4Q6PIL6 GNE-204ENST00000539208 2190 ntTSL 2 BASIC14.49□□□□□ -0.09
KCNIP4Q6PIL6 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
KCNIP4Q6PIL6 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
KCNIP4Q6PIL6 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
KCNIP4Q6PIL6 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC14.48□□□□□ -0.09
KCNIP4Q6PIL6 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
KCNIP4Q6PIL6 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
KCNIP4Q6PIL6 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC14.48□□□□□ -0.09
KCNIP4Q6PIL6 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
KCNIP4Q6PIL6 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
KCNIP4Q6PIL6 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
KCNIP4Q6PIL6 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
KCNIP4Q6PIL6 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
KCNIP4Q6PIL6 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
KCNIP4Q6PIL6 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC14.48□□□□□ -0.09
KCNIP4Q6PIL6 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
KCNIP4Q6PIL6 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
KCNIP4Q6PIL6 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
KCNIP4Q6PIL6 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
KCNIP4Q6PIL6 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
KCNIP4Q6PIL6 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
KCNIP4Q6PIL6 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
KCNIP4Q6PIL6 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
KCNIP4Q6PIL6 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
KCNIP4Q6PIL6 MTURN-203ENST00000409688 843 ntTSL 2 BASIC14.48□□□□□ -0.09
KCNIP4Q6PIL6 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC14.48□□□□□ -0.09
KCNIP4Q6PIL6 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC14.48□□□□□ -0.09
KCNIP4Q6PIL6 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC14.48□□□□□ -0.09
KCNIP4Q6PIL6 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
KCNIP4Q6PIL6 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
KCNIP4Q6PIL6 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
KCNIP4Q6PIL6 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC14.48□□□□□ -0.09
KCNIP4Q6PIL6 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC14.48□□□□□ -0.09
KCNIP4Q6PIL6 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
KCNIP4Q6PIL6 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.48□□□□□ -0.09
KCNIP4Q6PIL6 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
KCNIP4Q6PIL6 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
KCNIP4Q6PIL6 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
KCNIP4Q6PIL6 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
KCNIP4Q6PIL6 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
KCNIP4Q6PIL6 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
KCNIP4Q6PIL6 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
KCNIP4Q6PIL6 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
KCNIP4Q6PIL6 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
KCNIP4Q6PIL6 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
KCNIP4Q6PIL6 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
KCNIP4Q6PIL6 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC14.47□□□□□ -0.09
KCNIP4Q6PIL6 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC14.47□□□□□ -0.09
KCNIP4Q6PIL6 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
KCNIP4Q6PIL6 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
KCNIP4Q6PIL6 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
KCNIP4Q6PIL6 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
KCNIP4Q6PIL6 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
KCNIP4Q6PIL6 AC126755.1-201ENST00000525846 6405 ntBASIC14.47□□□□□ -0.09
KCNIP4Q6PIL6 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
KCNIP4Q6PIL6 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
KCNIP4Q6PIL6 AL645608.8-201ENST00000606034 2086 ntBASIC14.47□□□□□ -0.09
KCNIP4Q6PIL6 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC14.47□□□□□ -0.09
KCNIP4Q6PIL6 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
KCNIP4Q6PIL6 AC105265.2-201ENST00000467189 838 ntBASIC14.47□□□□□ -0.09
KCNIP4Q6PIL6 SUDS3P1-201ENST00000505831 966 ntBASIC14.47□□□□□ -0.09
KCNIP4Q6PIL6 AL356652.1-201ENST00000615962 565 ntBASIC14.47□□□□□ -0.09
KCNIP4Q6PIL6 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
KCNIP4Q6PIL6 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
KCNIP4Q6PIL6 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
KCNIP4Q6PIL6 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
KCNIP4Q6PIL6 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms