Protein–RNA interactions for Protein: P56539

CAV3, Caveolin-3, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAV3P56539 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CAV3P56539 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CAV3P56539 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CAV3P56539 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CAV3P56539 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CAV3P56539 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.66■□□□□ 0.26
CAV3P56539 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
CAV3P56539 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CAV3P56539 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CAV3P56539 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CAV3P56539 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CAV3P56539 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CAV3P56539 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CAV3P56539 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CAV3P56539 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC16.66■□□□□ 0.26
CAV3P56539 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC16.66■□□□□ 0.26
CAV3P56539 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC16.66■□□□□ 0.26
CAV3P56539 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CAV3P56539 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
CAV3P56539 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CAV3P56539 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CAV3P56539 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CAV3P56539 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CAV3P56539 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CAV3P56539 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CAV3P56539 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CAV3P56539 PCDHA12-202ENST00000613593 2588 ntBASIC16.66■□□□□ 0.26
CAV3P56539 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.66■□□□□ 0.26
CAV3P56539 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
CAV3P56539 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.66■□□□□ 0.26
CAV3P56539 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
CAV3P56539 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.66■□□□□ 0.26
CAV3P56539 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.66■□□□□ 0.26
CAV3P56539 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.65■□□□□ 0.26
CAV3P56539 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CAV3P56539 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAV3P56539 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CAV3P56539 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CAV3P56539 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CAV3P56539 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAV3P56539 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CAV3P56539 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAV3P56539 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAV3P56539 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAV3P56539 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAV3P56539 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAV3P56539 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAV3P56539 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAV3P56539 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAV3P56539 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CAV3P56539 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAV3P56539 GGT1-206ENST00000404223 952 ntTSL 2 BASIC16.65■□□□□ 0.26
CAV3P56539 AL390719.1-204ENST00000412397 1219 ntBASIC16.65■□□□□ 0.26
CAV3P56539 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC16.65■□□□□ 0.26
CAV3P56539 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CAV3P56539 KRT18P6-201ENST00000555540 1265 ntBASIC16.65■□□□□ 0.26
CAV3P56539 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CAV3P56539 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC16.65■□□□□ 0.26
CAV3P56539 AC005829.2-201ENST00000571422 1056 ntBASIC16.65■□□□□ 0.26
CAV3P56539 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAV3P56539 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAV3P56539 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CAV3P56539 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
CAV3P56539 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAV3P56539 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAV3P56539 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CAV3P56539 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAV3P56539 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CAV3P56539 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CAV3P56539 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAV3P56539 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CAV3P56539 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
CAV3P56539 AC092368.3-202ENST00000574180 1591 ntBASIC16.64■□□□□ 0.25
CAV3P56539 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CAV3P56539 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CAV3P56539 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CAV3P56539 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.64■□□□□ 0.25
CAV3P56539 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CAV3P56539 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CAV3P56539 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CAV3P56539 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CAV3P56539 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC16.64■□□□□ 0.25
CAV3P56539 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CAV3P56539 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC16.64■□□□□ 0.25
CAV3P56539 INO80E-214ENST00000620599 515 ntTSL 2 BASIC16.64■□□□□ 0.25
CAV3P56539 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.64■□□□□ 0.25
CAV3P56539 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
CAV3P56539 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CAV3P56539 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CAV3P56539 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.64■□□□□ 0.25
CAV3P56539 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CAV3P56539 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CAV3P56539 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CAV3P56539 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
CAV3P56539 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CAV3P56539 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CAV3P56539 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CAV3P56539 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.64■□□□□ 0.25
CAV3P56539 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CAV3P56539 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms