Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HMGA2P52926 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.08■□□□□ 0.32
HMGA2P52926 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
HMGA2P52926 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
HMGA2P52926 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HMGA2P52926 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HMGA2P52926 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HMGA2P52926 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMGA2P52926 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMGA2P52926 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMGA2P52926 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMGA2P52926 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.07■□□□□ 0.32
HMGA2P52926 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.07■□□□□ 0.32
HMGA2P52926 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
HMGA2P52926 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMGA2P52926 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMGA2P52926 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.07■□□□□ 0.32
HMGA2P52926 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.07■□□□□ 0.32
HMGA2P52926 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
HMGA2P52926 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.07■□□□□ 0.32
HMGA2P52926 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.07■□□□□ 0.32
HMGA2P52926 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMGA2P52926 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMGA2P52926 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HMGA2P52926 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HMGA2P52926 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HMGA2P52926 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
HMGA2P52926 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.06■□□□□ 0.32
HMGA2P52926 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGA2P52926 FLJ13224-201ENST00000313737 1514 ntBASIC17.06■□□□□ 0.32
HMGA2P52926 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGA2P52926 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
HMGA2P52926 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.06■□□□□ 0.32
HMGA2P52926 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGA2P52926 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGA2P52926 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.06■□□□□ 0.32
HMGA2P52926 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGA2P52926 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGA2P52926 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGA2P52926 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HMGA2P52926 AC004980.1-204ENST00000429707 299 ntBASIC17.06■□□□□ 0.32
HMGA2P52926 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGA2P52926 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HMGA2P52926 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.06■□□□□ 0.32
HMGA2P52926 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.06■□□□□ 0.32
HMGA2P52926 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HMGA2P52926 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.06■□□□□ 0.32
HMGA2P52926 AL109923.1-201ENST00000618799 583 ntBASIC17.06■□□□□ 0.32
HMGA2P52926 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.06■□□□□ 0.32
HMGA2P52926 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
HMGA2P52926 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGA2P52926 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGA2P52926 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGA2P52926 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGA2P52926 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.06■□□□□ 0.32
HMGA2P52926 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.06■□□□□ 0.32
HMGA2P52926 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HMGA2P52926 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMGA2P52926 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMGA2P52926 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
HMGA2P52926 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HMGA2P52926 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMGA2P52926 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.05■□□□□ 0.32
HMGA2P52926 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
HMGA2P52926 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMGA2P52926 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMGA2P52926 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
HMGA2P52926 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.05■□□□□ 0.32
HMGA2P52926 KRT17P3-201ENST00000420566 1262 ntBASIC17.05■□□□□ 0.32
HMGA2P52926 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.05■□□□□ 0.32
HMGA2P52926 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.05■□□□□ 0.32
HMGA2P52926 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.05■□□□□ 0.32
HMGA2P52926 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.05■□□□□ 0.32
HMGA2P52926 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.05■□□□□ 0.32
HMGA2P52926 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.05■□□□□ 0.32
HMGA2P52926 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMGA2P52926 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
HMGA2P52926 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMGA2P52926 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HMGA2P52926 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMGA2P52926 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.05■□□□□ 0.32
HMGA2P52926 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HMGA2P52926 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
HMGA2P52926 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.05■□□□□ 0.32
HMGA2P52926 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
HMGA2P52926 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMGA2P52926 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
HMGA2P52926 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMGA2P52926 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMGA2P52926 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.04■□□□□ 0.32
HMGA2P52926 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
HMGA2P52926 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.04■□□□□ 0.32
HMGA2P52926 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMGA2P52926 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMGA2P52926 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HMGA2P52926 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMGA2P52926 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HMGA2P52926 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.04■□□□□ 0.32
HMGA2P52926 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
HMGA2P52926 AC091390.4-202ENST00000476426 537 ntBASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms