Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 AC141586.3-201ENST00000562166 1838 ntBASIC18.09■□□□□ 0.49
CLCN2P51788 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLCN2P51788 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLCN2P51788 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLCN2P51788 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CLCN2P51788 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLCN2P51788 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLCN2P51788 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLCN2P51788 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLCN2P51788 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.08■□□□□ 0.49
CLCN2P51788 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLCN2P51788 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLCN2P51788 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CLCN2P51788 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.08■□□□□ 0.49
CLCN2P51788 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
CLCN2P51788 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLCN2P51788 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.08■□□□□ 0.49
CLCN2P51788 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLCN2P51788 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CLCN2P51788 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLCN2P51788 NUDT16P1-203ENST00000513809 620 ntBASIC18.08■□□□□ 0.48
CLCN2P51788 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.08■□□□□ 0.48
CLCN2P51788 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CLCN2P51788 AP003071.4-201ENST00000562276 1284 ntBASIC18.08■□□□□ 0.48
CLCN2P51788 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.08■□□□□ 0.48
CLCN2P51788 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
CLCN2P51788 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.08■□□□□ 0.48
CLCN2P51788 AL031985.4-201ENST00000642138 673 ntBASIC18.08■□□□□ 0.48
CLCN2P51788 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CLCN2P51788 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
CLCN2P51788 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
CLCN2P51788 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
CLCN2P51788 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLCN2P51788 AC008764.6-201ENST00000595909 2069 ntBASIC18.08■□□□□ 0.48
CLCN2P51788 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLCN2P51788 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CLCN2P51788 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.08■□□□□ 0.48
CLCN2P51788 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLCN2P51788 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
CLCN2P51788 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CLCN2P51788 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLCN2P51788 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLCN2P51788 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLCN2P51788 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLCN2P51788 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.07■□□□□ 0.48
CLCN2P51788 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.07■□□□□ 0.48
CLCN2P51788 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLCN2P51788 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLCN2P51788 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLCN2P51788 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLCN2P51788 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLCN2P51788 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLCN2P51788 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CLCN2P51788 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLCN2P51788 TEX21P-204ENST00000641479 1693 ntBASIC18.07■□□□□ 0.48
CLCN2P51788 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLCN2P51788 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.07■□□□□ 0.48
CLCN2P51788 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.07■□□□□ 0.48
CLCN2P51788 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.07■□□□□ 0.48
CLCN2P51788 AC131212.4-201ENST00000623606 975 ntBASIC18.07■□□□□ 0.48
CLCN2P51788 AC067852.2-201ENST00000590513 2313 ntBASIC18.07■□□□□ 0.48
CLCN2P51788 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLCN2P51788 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLCN2P51788 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.07■□□□□ 0.48
CLCN2P51788 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLCN2P51788 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLCN2P51788 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLCN2P51788 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLCN2P51788 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLCN2P51788 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLCN2P51788 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLCN2P51788 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLCN2P51788 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.07■□□□□ 0.48
CLCN2P51788 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLCN2P51788 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLCN2P51788 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.06■□□□□ 0.48
CLCN2P51788 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLCN2P51788 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.06■□□□□ 0.48
CLCN2P51788 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.06■□□□□ 0.48
CLCN2P51788 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CLCN2P51788 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CLCN2P51788 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLCN2P51788 AL162741.1-201ENST00000565563 1558 ntBASIC18.06■□□□□ 0.48
CLCN2P51788 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
CLCN2P51788 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CLCN2P51788 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLCN2P51788 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.06■□□□□ 0.48
CLCN2P51788 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLCN2P51788 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLCN2P51788 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLCN2P51788 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.06■□□□□ 0.48
CLCN2P51788 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.06■□□□□ 0.48
CLCN2P51788 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLCN2P51788 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.06■□□□□ 0.48
CLCN2P51788 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLCN2P51788 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLCN2P51788 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLCN2P51788 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
CLCN2P51788 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.06■□□□□ 0.48
CLCN2P51788 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms