Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDE6CP51160 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.19■□□□□ 0.82
PDE6CP51160 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PDE6CP51160 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PDE6CP51160 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.19■□□□□ 0.82
PDE6CP51160 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.19■□□□□ 0.82
PDE6CP51160 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
PDE6CP51160 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PDE6CP51160 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.19■□□□□ 0.82
PDE6CP51160 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDE6CP51160 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDE6CP51160 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDE6CP51160 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.18■□□□□ 0.82
PDE6CP51160 SLC25A3P1-201ENST00000443844 931 ntBASIC20.18■□□□□ 0.82
PDE6CP51160 AC008040.2-201ENST00000461049 708 ntBASIC20.18■□□□□ 0.82
PDE6CP51160 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.18■□□□□ 0.82
PDE6CP51160 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.18■□□□□ 0.82
PDE6CP51160 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.18■□□□□ 0.82
PDE6CP51160 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.18■□□□□ 0.82
PDE6CP51160 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDE6CP51160 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PDE6CP51160 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.18■□□□□ 0.82
PDE6CP51160 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.18■□□□□ 0.82
PDE6CP51160 ANO7L1-203ENST00000602586 1720 ntBASIC20.18■□□□□ 0.82
PDE6CP51160 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PDE6CP51160 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.18■□□□□ 0.82
PDE6CP51160 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.18■□□□□ 0.82
PDE6CP51160 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
PDE6CP51160 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
PDE6CP51160 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDE6CP51160 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDE6CP51160 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDE6CP51160 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDE6CP51160 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDE6CP51160 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.17■□□□□ 0.82
PDE6CP51160 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDE6CP51160 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.17■□□□□ 0.82
PDE6CP51160 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.17■□□□□ 0.82
PDE6CP51160 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDE6CP51160 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.17■□□□□ 0.82
PDE6CP51160 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.17■□□□□ 0.82
PDE6CP51160 CKBP1-201ENST00000565489 1086 ntBASIC20.17■□□□□ 0.82
PDE6CP51160 RN7SL850P-201ENST00000579959 291 ntBASIC20.17■□□□□ 0.82
PDE6CP51160 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.17■□□□□ 0.82
PDE6CP51160 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.17■□□□□ 0.82
PDE6CP51160 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
PDE6CP51160 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PDE6CP51160 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
PDE6CP51160 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PDE6CP51160 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.17■□□□□ 0.82
PDE6CP51160 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDE6CP51160 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
PDE6CP51160 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDE6CP51160 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDE6CP51160 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDE6CP51160 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PDE6CP51160 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDE6CP51160 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
PDE6CP51160 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
PDE6CP51160 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.16■□□□□ 0.82
PDE6CP51160 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDE6CP51160 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDE6CP51160 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDE6CP51160 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDE6CP51160 AC005521.1-201ENST00000393351 872 ntBASIC20.16■□□□□ 0.82
PDE6CP51160 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDE6CP51160 MFAP1P1-201ENST00000442257 1255 ntBASIC20.16■□□□□ 0.82
PDE6CP51160 CCR12P-201ENST00000446203 998 ntBASIC20.16■□□□□ 0.82
PDE6CP51160 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.16■□□□□ 0.82
PDE6CP51160 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PDE6CP51160 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.16■□□□□ 0.82
PDE6CP51160 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PDE6CP51160 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.16■□□□□ 0.82
PDE6CP51160 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PDE6CP51160 KRT8P3-201ENST00000519669 1449 ntBASIC20.16■□□□□ 0.82
PDE6CP51160 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PDE6CP51160 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PDE6CP51160 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.16■□□□□ 0.82
PDE6CP51160 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDE6CP51160 HEIH-201ENST00000623091 1652 ntBASIC20.16■□□□□ 0.82
PDE6CP51160 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PDE6CP51160 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
PDE6CP51160 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDE6CP51160 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.15■□□□□ 0.82
PDE6CP51160 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
PDE6CP51160 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDE6CP51160 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDE6CP51160 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDE6CP51160 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDE6CP51160 WIZP1-201ENST00000531444 2299 ntBASIC20.15■□□□□ 0.82
PDE6CP51160 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
PDE6CP51160 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.15■□□□□ 0.82
PDE6CP51160 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDE6CP51160 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDE6CP51160 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PDE6CP51160 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDE6CP51160 LIN28AP1-201ENST00000429574 405 ntBASIC20.15■□□□□ 0.82
PDE6CP51160 SLC25A1P2-201ENST00000430693 912 ntBASIC20.15■□□□□ 0.82
PDE6CP51160 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.15■□□□□ 0.82
PDE6CP51160 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms