Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
BRCC3P46736 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
BRCC3P46736 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.87■□□□□ 0.77
BRCC3P46736 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
BRCC3P46736 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
BRCC3P46736 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.86■□□□□ 0.77
BRCC3P46736 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
BRCC3P46736 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
BRCC3P46736 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.86■□□□□ 0.77
BRCC3P46736 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
BRCC3P46736 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
BRCC3P46736 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.86■□□□□ 0.77
BRCC3P46736 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
BRCC3P46736 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.86■□□□□ 0.77
BRCC3P46736 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
BRCC3P46736 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
BRCC3P46736 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.86■□□□□ 0.77
BRCC3P46736 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
BRCC3P46736 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
BRCC3P46736 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
BRCC3P46736 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.86■□□□□ 0.77
BRCC3P46736 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
BRCC3P46736 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.86■□□□□ 0.77
BRCC3P46736 AC011498.5-201ENST00000592027 486 ntBASIC19.86■□□□□ 0.77
BRCC3P46736 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.86■□□□□ 0.77
BRCC3P46736 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.86■□□□□ 0.77
BRCC3P46736 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.86■□□□□ 0.77
BRCC3P46736 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.86■□□□□ 0.77
BRCC3P46736 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.86■□□□□ 0.77
BRCC3P46736 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
BRCC3P46736 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.86■□□□□ 0.77
BRCC3P46736 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
BRCC3P46736 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
BRCC3P46736 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
BRCC3P46736 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.86■□□□□ 0.77
BRCC3P46736 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.86■□□□□ 0.77
BRCC3P46736 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
BRCC3P46736 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
BRCC3P46736 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
BRCC3P46736 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
BRCC3P46736 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
BRCC3P46736 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
BRCC3P46736 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
BRCC3P46736 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
BRCC3P46736 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.85■□□□□ 0.77
BRCC3P46736 MIR662-201ENST00000384847 95 ntBASIC19.85■□□□□ 0.77
BRCC3P46736 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
BRCC3P46736 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.85■□□□□ 0.77
BRCC3P46736 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
BRCC3P46736 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.85■□□□□ 0.77
BRCC3P46736 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
BRCC3P46736 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
BRCC3P46736 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
BRCC3P46736 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
BRCC3P46736 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
BRCC3P46736 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.84■□□□□ 0.77
BRCC3P46736 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
BRCC3P46736 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
BRCC3P46736 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
BRCC3P46736 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
BRCC3P46736 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
BRCC3P46736 ATP5G2P1-201ENST00000433580 426 ntBASIC19.84■□□□□ 0.77
BRCC3P46736 KRT18P48-201ENST00000434763 852 ntBASIC19.84■□□□□ 0.77
BRCC3P46736 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.84■□□□□ 0.77
BRCC3P46736 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.84■□□□□ 0.77
BRCC3P46736 NPAP1P7-201ENST00000613027 823 ntBASIC19.84■□□□□ 0.77
BRCC3P46736 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
BRCC3P46736 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
BRCC3P46736 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
BRCC3P46736 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
BRCC3P46736 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
BRCC3P46736 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
BRCC3P46736 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
BRCC3P46736 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
BRCC3P46736 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
BRCC3P46736 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.83■□□□□ 0.77
BRCC3P46736 AC016734.2-201ENST00000624325 1377 ntBASIC19.83■□□□□ 0.77
BRCC3P46736 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
BRCC3P46736 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
BRCC3P46736 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.83■□□□□ 0.77
BRCC3P46736 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
BRCC3P46736 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
BRCC3P46736 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
BRCC3P46736 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
BRCC3P46736 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
BRCC3P46736 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
BRCC3P46736 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
BRCC3P46736 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
BRCC3P46736 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
BRCC3P46736 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
BRCC3P46736 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.83■□□□□ 0.77
BRCC3P46736 RNF126P1-202ENST00000569893 925 ntBASIC19.83■□□□□ 0.77
BRCC3P46736 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.83■□□□□ 0.77
BRCC3P46736 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
BRCC3P46736 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
BRCC3P46736 AC092119.3-201ENST00000612618 583 ntBASIC19.83■□□□□ 0.77
BRCC3P46736 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
BRCC3P46736 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
BRCC3P46736 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
BRCC3P46736 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms