Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.2■□□□□ 0.5
EPHA3P29320 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
EPHA3P29320 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
EPHA3P29320 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
EPHA3P29320 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.2■□□□□ 0.5
EPHA3P29320 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
EPHA3P29320 AC068587.9-201ENST00000641814 219 ntBASIC18.2■□□□□ 0.5
EPHA3P29320 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
EPHA3P29320 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
EPHA3P29320 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.2■□□□□ 0.5
EPHA3P29320 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.2■□□□□ 0.5
EPHA3P29320 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
EPHA3P29320 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
EPHA3P29320 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
EPHA3P29320 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.2■□□□□ 0.5
EPHA3P29320 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
EPHA3P29320 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
EPHA3P29320 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
EPHA3P29320 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
EPHA3P29320 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
EPHA3P29320 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
EPHA3P29320 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
EPHA3P29320 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
EPHA3P29320 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
EPHA3P29320 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
EPHA3P29320 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
EPHA3P29320 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
EPHA3P29320 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
EPHA3P29320 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.19■□□□□ 0.5
EPHA3P29320 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
EPHA3P29320 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
EPHA3P29320 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
EPHA3P29320 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
EPHA3P29320 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
EPHA3P29320 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
EPHA3P29320 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
EPHA3P29320 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
EPHA3P29320 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.19■□□□□ 0.5
EPHA3P29320 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.19■□□□□ 0.5
EPHA3P29320 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.19■□□□□ 0.5
EPHA3P29320 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
EPHA3P29320 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
EPHA3P29320 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.19■□□□□ 0.5
EPHA3P29320 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
EPHA3P29320 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.19■□□□□ 0.5
EPHA3P29320 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
EPHA3P29320 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
EPHA3P29320 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
EPHA3P29320 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
EPHA3P29320 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EPHA3P29320 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
EPHA3P29320 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EPHA3P29320 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EPHA3P29320 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
EPHA3P29320 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EPHA3P29320 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
EPHA3P29320 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EPHA3P29320 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.18■□□□□ 0.5
EPHA3P29320 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.18■□□□□ 0.5
EPHA3P29320 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.18■□□□□ 0.5
EPHA3P29320 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EPHA3P29320 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EPHA3P29320 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
EPHA3P29320 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EPHA3P29320 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.18■□□□□ 0.5
EPHA3P29320 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
EPHA3P29320 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.18■□□□□ 0.5
EPHA3P29320 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.18■□□□□ 0.5
EPHA3P29320 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
EPHA3P29320 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EPHA3P29320 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.18■□□□□ 0.5
EPHA3P29320 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.18■□□□□ 0.5
EPHA3P29320 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
EPHA3P29320 NBPF21P-201ENST00000425093 1451 ntBASIC18.18■□□□□ 0.5
EPHA3P29320 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.18■□□□□ 0.5
EPHA3P29320 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
EPHA3P29320 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EPHA3P29320 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
EPHA3P29320 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
EPHA3P29320 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
EPHA3P29320 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
EPHA3P29320 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
EPHA3P29320 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
EPHA3P29320 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.18■□□□□ 0.5
EPHA3P29320 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
EPHA3P29320 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
EPHA3P29320 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
EPHA3P29320 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
EPHA3P29320 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
EPHA3P29320 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
EPHA3P29320 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.17■□□□□ 0.5
EPHA3P29320 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
EPHA3P29320 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
EPHA3P29320 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.17■□□□□ 0.5
EPHA3P29320 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.17■□□□□ 0.5
EPHA3P29320 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.17■□□□□ 0.5
EPHA3P29320 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.17■□□□□ 0.5
EPHA3P29320 PRKY-204ENST00000533551 1019 ntBASIC18.17■□□□□ 0.5
EPHA3P29320 AL138781.1-201ENST00000566567 1274 ntBASIC18.17■□□□□ 0.5
EPHA3P29320 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms