Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL2P13500 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.28■□□□□ 0.2
CCL2P13500 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CCL2P13500 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL2P13500 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL2P13500 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL2P13500 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCL2P13500 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.28■□□□□ 0.2
CCL2P13500 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL2P13500 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.28■□□□□ 0.2
CCL2P13500 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.28■□□□□ 0.2
CCL2P13500 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCL2P13500 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
CCL2P13500 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.27■□□□□ 0.2
CCL2P13500 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCL2P13500 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCL2P13500 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCL2P13500 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC16.27■□□□□ 0.2
CCL2P13500 AC036111.1-201ENST00000533973 1582 ntBASIC16.27■□□□□ 0.2
CCL2P13500 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCL2P13500 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CCL2P13500 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CCL2P13500 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.27■□□□□ 0.2
CCL2P13500 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.27■□□□□ 0.2
CCL2P13500 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.27■□□□□ 0.2
CCL2P13500 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCL2P13500 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.27■□□□□ 0.2
CCL2P13500 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.27■□□□□ 0.2
CCL2P13500 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.27■□□□□ 0.2
CCL2P13500 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
CCL2P13500 MTMR9LP-203ENST00000426597 1545 ntBASIC16.27■□□□□ 0.2
CCL2P13500 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.27■□□□□ 0.2
CCL2P13500 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCL2P13500 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCL2P13500 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CCL2P13500 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCL2P13500 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.27■□□□□ 0.19
CCL2P13500 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCL2P13500 KRT8P45-201ENST00000414328 1447 ntBASIC16.27■□□□□ 0.19
CCL2P13500 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.27■□□□□ 0.19
CCL2P13500 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCL2P13500 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.26■□□□□ 0.19
CCL2P13500 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.26■□□□□ 0.19
CCL2P13500 AL357033.4-201ENST00000617703 1807 ntBASIC16.26■□□□□ 0.19
CCL2P13500 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCL2P13500 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCL2P13500 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL2P13500 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL2P13500 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL2P13500 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.26■□□□□ 0.19
CCL2P13500 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL2P13500 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL2P13500 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL2P13500 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL2P13500 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.26■□□□□ 0.19
CCL2P13500 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CCL2P13500 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.26■□□□□ 0.19
CCL2P13500 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.26■□□□□ 0.19
CCL2P13500 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.26■□□□□ 0.19
CCL2P13500 LINC01023-201ENST00000606054 436 ntBASIC16.26■□□□□ 0.19
CCL2P13500 AC012306.2-201ENST00000609350 630 ntBASIC16.26■□□□□ 0.19
CCL2P13500 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
CCL2P13500 AC010653.2-201ENST00000623505 997 ntBASIC16.26■□□□□ 0.19
CCL2P13500 AC097493.4-201ENST00000641197 219 ntBASIC16.26■□□□□ 0.19
CCL2P13500 AL020996.1-203ENST00000536896 2307 ntBASIC16.26■□□□□ 0.19
CCL2P13500 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL2P13500 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCL2P13500 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC16.26■□□□□ 0.19
CCL2P13500 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CCL2P13500 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCL2P13500 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.26■□□□□ 0.19
CCL2P13500 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CCL2P13500 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL2P13500 AL499627.1-201ENST00000569373 2188 ntBASIC16.26■□□□□ 0.19
CCL2P13500 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL2P13500 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCL2P13500 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCL2P13500 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.25■□□□□ 0.19
CCL2P13500 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.25■□□□□ 0.19
CCL2P13500 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCL2P13500 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CCL2P13500 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCL2P13500 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.25■□□□□ 0.19
CCL2P13500 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCL2P13500 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCL2P13500 RNF165-205ENST00000588679 2904 ntBASIC16.25■□□□□ 0.19
CCL2P13500 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.25■□□□□ 0.19
CCL2P13500 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.25■□□□□ 0.19
CCL2P13500 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
CCL2P13500 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.25■□□□□ 0.19
CCL2P13500 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.25■□□□□ 0.19
CCL2P13500 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCL2P13500 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCL2P13500 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCL2P13500 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CCL2P13500 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCL2P13500 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCL2P13500 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.24■□□□□ 0.19
CCL2P13500 AC099343.3-201ENST00000605834 2503 ntBASIC16.24■□□□□ 0.19
CCL2P13500 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms