Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
UBL4AP11441 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
UBL4AP11441 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
UBL4AP11441 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.29■□□□□ 0.36
UBL4AP11441 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.29■□□□□ 0.36
UBL4AP11441 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
UBL4AP11441 AC007613.1-201ENST00000572811 2597 ntBASIC17.29■□□□□ 0.36
UBL4AP11441 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.29■□□□□ 0.36
UBL4AP11441 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.29■□□□□ 0.36
UBL4AP11441 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
UBL4AP11441 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBL4AP11441 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBL4AP11441 AC093525.10-201ENST00000625130 1569 ntBASIC17.28■□□□□ 0.36
UBL4AP11441 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBL4AP11441 KRT17P2-201ENST00000300992 1314 ntBASIC17.28■□□□□ 0.36
UBL4AP11441 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.28■□□□□ 0.36
UBL4AP11441 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBL4AP11441 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
UBL4AP11441 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBL4AP11441 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBL4AP11441 UNC93B2-201ENST00000285383 730 ntBASIC17.28■□□□□ 0.36
UBL4AP11441 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.28■□□□□ 0.36
UBL4AP11441 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBL4AP11441 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.28■□□□□ 0.36
UBL4AP11441 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
UBL4AP11441 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.28■□□□□ 0.36
UBL4AP11441 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.28■□□□□ 0.36
UBL4AP11441 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
UBL4AP11441 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.28■□□□□ 0.36
UBL4AP11441 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBL4AP11441 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBL4AP11441 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBL4AP11441 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBL4AP11441 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBL4AP11441 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBL4AP11441 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBL4AP11441 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBL4AP11441 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
UBL4AP11441 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.28■□□□□ 0.36
UBL4AP11441 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBL4AP11441 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
UBL4AP11441 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.27■□□□□ 0.36
UBL4AP11441 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
UBL4AP11441 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.27■□□□□ 0.36
UBL4AP11441 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
UBL4AP11441 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
UBL4AP11441 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
UBL4AP11441 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
UBL4AP11441 AP000997.3-201ENST00000623333 2250 ntBASIC17.27■□□□□ 0.36
UBL4AP11441 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
UBL4AP11441 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.27■□□□□ 0.36
UBL4AP11441 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
UBL4AP11441 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.27■□□□□ 0.36
UBL4AP11441 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
UBL4AP11441 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
UBL4AP11441 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
UBL4AP11441 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
UBL4AP11441 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
UBL4AP11441 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
UBL4AP11441 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
UBL4AP11441 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
UBL4AP11441 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
UBL4AP11441 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
UBL4AP11441 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
UBL4AP11441 RBM17P1-201ENST00000453646 1190 ntBASIC17.27■□□□□ 0.36
UBL4AP11441 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.27■□□□□ 0.36
UBL4AP11441 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
UBL4AP11441 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.27■□□□□ 0.36
UBL4AP11441 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.27■□□□□ 0.36
UBL4AP11441 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
UBL4AP11441 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
UBL4AP11441 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
UBL4AP11441 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
UBL4AP11441 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
UBL4AP11441 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
UBL4AP11441 Z98044.1-201ENST00000632503 1764 ntBASIC17.27■□□□□ 0.35
UBL4AP11441 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
UBL4AP11441 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
UBL4AP11441 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.27■□□□□ 0.35
UBL4AP11441 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
UBL4AP11441 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
UBL4AP11441 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.26■□□□□ 0.35
UBL4AP11441 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
UBL4AP11441 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBL4AP11441 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
UBL4AP11441 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBL4AP11441 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBL4AP11441 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBL4AP11441 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
UBL4AP11441 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBL4AP11441 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
UBL4AP11441 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.26■□□□□ 0.35
UBL4AP11441 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBL4AP11441 AL512353.2-201ENST00000448759 1962 ntBASIC17.26■□□□□ 0.35
UBL4AP11441 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.26■□□□□ 0.35
UBL4AP11441 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.26■□□□□ 0.35
UBL4AP11441 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBL4AP11441 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBL4AP11441 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.26■□□□□ 0.35
UBL4AP11441 AC020763.4-201ENST00000623414 4170 ntBASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms