Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CD28P10747 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
CD28P10747 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CD28P10747 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CD28P10747 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC14.6□□□□□ -0.07
CD28P10747 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC14.6□□□□□ -0.07
CD28P10747 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CD28P10747 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CD28P10747 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CD28P10747 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC14.6□□□□□ -0.07
CD28P10747 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CD28P10747 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CD28P10747 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC14.6□□□□□ -0.07
CD28P10747 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC14.6□□□□□ -0.07
CD28P10747 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC14.6□□□□□ -0.07
CD28P10747 DUSP5P1-201ENST00000441325 1139 ntBASIC14.6□□□□□ -0.07
CD28P10747 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC14.6□□□□□ -0.07
CD28P10747 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC14.6□□□□□ -0.07
CD28P10747 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC14.6□□□□□ -0.07
CD28P10747 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CD28P10747 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CD28P10747 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CD28P10747 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC14.6□□□□□ -0.07
CD28P10747 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CD28P10747 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CD28P10747 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CD28P10747 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CD28P10747 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC14.6□□□□□ -0.07
CD28P10747 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
CD28P10747 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC14.6□□□□□ -0.07
CD28P10747 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CD28P10747 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CD28P10747 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CD28P10747 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CD28P10747 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CD28P10747 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CD28P10747 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
CD28P10747 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CD28P10747 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC14.59□□□□□ -0.07
CD28P10747 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CD28P10747 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CD28P10747 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CD28P10747 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CD28P10747 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CD28P10747 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC14.59□□□□□ -0.07
CD28P10747 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CD28P10747 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CD28P10747 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC14.59□□□□□ -0.07
CD28P10747 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CD28P10747 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC14.59□□□□□ -0.07
CD28P10747 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC14.59□□□□□ -0.07
CD28P10747 CLEC4GP1-201ENST00000596555 870 ntBASIC14.59□□□□□ -0.07
CD28P10747 BCL10-202ENST00000620248 774 ntTSL 5 BASIC14.59□□□□□ -0.07
CD28P10747 AC112497.1-201ENST00000624824 639 ntBASIC14.59□□□□□ -0.07
CD28P10747 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC14.59□□□□□ -0.07
CD28P10747 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CD28P10747 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CD28P10747 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CD28P10747 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CD28P10747 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CD28P10747 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CD28P10747 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC14.59□□□□□ -0.07
CD28P10747 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CD28P10747 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CD28P10747 AC125437.2-201ENST00000625180 2167 ntBASIC14.58□□□□□ -0.07
CD28P10747 TEX21P-204ENST00000641479 1693 ntBASIC14.58□□□□□ -0.07
CD28P10747 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC14.58□□□□□ -0.07
CD28P10747 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
CD28P10747 ME2-218ENST00000640965 2476 ntTSL 5 BASIC14.58□□□□□ -0.07
CD28P10747 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC14.58□□□□□ -0.07
CD28P10747 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CD28P10747 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CD28P10747 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CD28P10747 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CD28P10747 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC14.58□□□□□ -0.08
CD28P10747 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
CD28P10747 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CD28P10747 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CD28P10747 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CD28P10747 RCC2P3-201ENST00000418112 1537 ntBASIC14.58□□□□□ -0.08
CD28P10747 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC14.58□□□□□ -0.08
CD28P10747 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CD28P10747 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CD28P10747 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
CD28P10747 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CD28P10747 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
CD28P10747 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CD28P10747 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CD28P10747 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CD28P10747 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CD28P10747 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC14.58□□□□□ -0.08
CD28P10747 CNP-204ENST00000472031 1019 ntTSL 2 BASIC14.58□□□□□ -0.08
CD28P10747 SEC1P-202ENST00000473944 940 ntBASIC14.58□□□□□ -0.08
CD28P10747 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC14.58□□□□□ -0.08
CD28P10747 AL157888.1-201ENST00000631930 593 ntBASIC14.58□□□□□ -0.08
CD28P10747 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC14.58□□□□□ -0.08
CD28P10747 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CD28P10747 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CD28P10747 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CD28P10747 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms