Protein–RNA interactions for Protein: P0C221

CCDC175, Coiled-coil domain-containing protein 175, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC175P0C221 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC175P0C221 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC175P0C221 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CCDC175P0C221 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC175P0C221 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC175P0C221 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC175P0C221 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC175P0C221 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC20.18■□□□□ 0.82
CCDC175P0C221 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC175P0C221 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC175P0C221 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC175P0C221 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.18■□□□□ 0.82
CCDC175P0C221 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC175P0C221 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC175P0C221 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.18■□□□□ 0.82
CCDC175P0C221 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC175P0C221 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC175P0C221 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.18■□□□□ 0.82
CCDC175P0C221 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
CCDC175P0C221 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC175P0C221 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC175P0C221 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC175P0C221 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC175P0C221 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.18■□□□□ 0.82
CCDC175P0C221 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.18■□□□□ 0.82
CCDC175P0C221 AC068587.9-201ENST00000641814 219 ntBASIC20.18■□□□□ 0.82
CCDC175P0C221 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CCDC175P0C221 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.18■□□□□ 0.82
CCDC175P0C221 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC175P0C221 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC175P0C221 FST-202ENST00000396947 2538 ntTSL 5 BASIC20.18■□□□□ 0.82
CCDC175P0C221 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC175P0C221 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC175P0C221 AC138028.4-201ENST00000564984 1845 ntBASIC20.18■□□□□ 0.82
CCDC175P0C221 AC093677.2-201ENST00000600169 1863 ntBASIC20.18■□□□□ 0.82
CCDC175P0C221 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC175P0C221 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC175P0C221 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.17■□□□□ 0.82
CCDC175P0C221 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.17■□□□□ 0.82
CCDC175P0C221 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC175P0C221 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC175P0C221 AC092368.3-202ENST00000574180 1591 ntBASIC20.17■□□□□ 0.82
CCDC175P0C221 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
CCDC175P0C221 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC20.17■□□□□ 0.82
CCDC175P0C221 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC20.17■□□□□ 0.82
CCDC175P0C221 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.17■□□□□ 0.82
CCDC175P0C221 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.17■□□□□ 0.82
CCDC175P0C221 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.17■□□□□ 0.82
CCDC175P0C221 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.17■□□□□ 0.82
CCDC175P0C221 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC175P0C221 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.17■□□□□ 0.82
CCDC175P0C221 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.17■□□□□ 0.82
CCDC175P0C221 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC175P0C221 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC175P0C221 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC175P0C221 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.17■□□□□ 0.82
CCDC175P0C221 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC175P0C221 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
CCDC175P0C221 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CCDC175P0C221 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC175P0C221 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.17■□□□□ 0.82
CCDC175P0C221 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC20.17■□□□□ 0.82
CCDC175P0C221 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC175P0C221 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC175P0C221 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CCDC175P0C221 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC175P0C221 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC175P0C221 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC175P0C221 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC175P0C221 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CCDC175P0C221 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC175P0C221 FLYWCH1P1-201ENST00000460917 1874 ntBASIC20.16■□□□□ 0.82
CCDC175P0C221 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC175P0C221 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC175P0C221 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC175P0C221 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC175P0C221 AC026271.2-201ENST00000428091 497 ntBASIC20.16■□□□□ 0.82
CCDC175P0C221 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC175P0C221 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC175P0C221 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC175P0C221 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC175P0C221 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.16■□□□□ 0.82
CCDC175P0C221 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC175P0C221 AL050303.2-201ENST00000619798 666 ntBASIC20.16■□□□□ 0.82
CCDC175P0C221 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.16■□□□□ 0.82
CCDC175P0C221 PRORSD1P-202ENST00000563365 2154 ntBASIC20.16■□□□□ 0.82
CCDC175P0C221 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC175P0C221 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC175P0C221 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC175P0C221 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CCDC175P0C221 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC175P0C221 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC175P0C221 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.16■□□□□ 0.82
CCDC175P0C221 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CCDC175P0C221 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.15■□□□□ 0.82
CCDC175P0C221 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC175P0C221 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.15■□□□□ 0.82
CCDC175P0C221 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC20.15■□□□□ 0.82
CCDC175P0C221 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCDC175P0C221 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms