Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 AC068587.9-201ENST00000641814 219 ntBASIC16.95■□□□□ 0.3
HMGN1P05114 AC133041.1-202ENST00000642053 222 ntBASIC16.95■□□□□ 0.3
HMGN1P05114 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HMGN1P05114 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.95■□□□□ 0.3
HMGN1P05114 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMGN1P05114 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMGN1P05114 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMGN1P05114 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.95■□□□□ 0.3
HMGN1P05114 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
HMGN1P05114 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMGN1P05114 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HMGN1P05114 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMGN1P05114 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
HMGN1P05114 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.95■□□□□ 0.3
HMGN1P05114 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HMGN1P05114 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.95■□□□□ 0.3
HMGN1P05114 AC112777.1-201ENST00000540175 1423 ntBASIC16.95■□□□□ 0.3
HMGN1P05114 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMGN1P05114 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMGN1P05114 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
HMGN1P05114 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMGN1P05114 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HMGN1P05114 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMGN1P05114 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMGN1P05114 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMGN1P05114 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.94■□□□□ 0.3
HMGN1P05114 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMGN1P05114 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
HMGN1P05114 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.94■□□□□ 0.3
HMGN1P05114 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
HMGN1P05114 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.94■□□□□ 0.3
HMGN1P05114 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMGN1P05114 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMGN1P05114 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.94■□□□□ 0.3
HMGN1P05114 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.94■□□□□ 0.3
HMGN1P05114 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.94■□□□□ 0.3
HMGN1P05114 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC16.94■□□□□ 0.3
HMGN1P05114 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HMGN1P05114 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.94■□□□□ 0.3
HMGN1P05114 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
HMGN1P05114 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMGN1P05114 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
HMGN1P05114 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HMGN1P05114 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
HMGN1P05114 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC16.94■□□□□ 0.3
HMGN1P05114 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HMGN1P05114 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
HMGN1P05114 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
HMGN1P05114 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMGN1P05114 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HMGN1P05114 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HMGN1P05114 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMGN1P05114 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.93■□□□□ 0.3
HMGN1P05114 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.93■□□□□ 0.3
HMGN1P05114 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
HMGN1P05114 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMGN1P05114 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HMGN1P05114 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMGN1P05114 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
HMGN1P05114 MTMR9LP-203ENST00000426597 1545 ntBASIC16.93■□□□□ 0.3
HMGN1P05114 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMGN1P05114 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.93■□□□□ 0.3
HMGN1P05114 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.93■□□□□ 0.3
HMGN1P05114 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.93■□□□□ 0.3
HMGN1P05114 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HMGN1P05114 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC16.93■□□□□ 0.3
HMGN1P05114 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.93■□□□□ 0.3
HMGN1P05114 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC16.93■□□□□ 0.3
HMGN1P05114 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HMGN1P05114 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC16.93■□□□□ 0.3
HMGN1P05114 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMGN1P05114 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HMGN1P05114 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.93■□□□□ 0.3
HMGN1P05114 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HMGN1P05114 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMGN1P05114 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
HMGN1P05114 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMGN1P05114 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.93■□□□□ 0.3
HMGN1P05114 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HMGN1P05114 PKD1P1-201ENST00000458669 6805 ntBASIC16.93■□□□□ 0.3
HMGN1P05114 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMGN1P05114 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMGN1P05114 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HMGN1P05114 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.93■□□□□ 0.3
HMGN1P05114 KRT8P32-201ENST00000512863 1461 ntBASIC16.93■□□□□ 0.3
HMGN1P05114 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.93■□□□□ 0.3
HMGN1P05114 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HMGN1P05114 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
HMGN1P05114 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.92■□□□□ 0.3
HMGN1P05114 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HMGN1P05114 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
HMGN1P05114 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMGN1P05114 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HMGN1P05114 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMGN1P05114 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMGN1P05114 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
HMGN1P05114 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
HMGN1P05114 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC16.92■□□□□ 0.3
HMGN1P05114 MAP2K4P1-201ENST00000438453 1195 ntBASIC16.92■□□□□ 0.3
HMGN1P05114 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms