Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.15■□□□□ 0.18
HLA-DQB1P01920 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.15■□□□□ 0.18
HLA-DQB1P01920 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.15■□□□□ 0.18
HLA-DQB1P01920 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HLA-DQB1P01920 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
HLA-DQB1P01920 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.15■□□□□ 0.18
HLA-DQB1P01920 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.14■□□□□ 0.18
HLA-DQB1P01920 AC018695.7-201ENST00000624587 2492 ntBASIC16.14■□□□□ 0.18
HLA-DQB1P01920 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.14■□□□□ 0.18
HLA-DQB1P01920 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
HLA-DQB1P01920 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.14■□□□□ 0.17
HLA-DQB1P01920 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DQB1P01920 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DQB1P01920 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DQB1P01920 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DQB1P01920 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DQB1P01920 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
HLA-DQB1P01920 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DQB1P01920 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
HLA-DQB1P01920 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.14■□□□□ 0.17
HLA-DQB1P01920 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DQB1P01920 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.14■□□□□ 0.17
HLA-DQB1P01920 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.14■□□□□ 0.17
HLA-DQB1P01920 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DQB1P01920 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DQB1P01920 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DQB1P01920 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DQB1P01920 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC16.14■□□□□ 0.17
HLA-DQB1P01920 AC073210.2-201ENST00000430369 194 ntBASIC16.14■□□□□ 0.17
HLA-DQB1P01920 YBX1P10-201ENST00000444752 975 ntBASIC16.14■□□□□ 0.17
HLA-DQB1P01920 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DQB1P01920 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC16.14■□□□□ 0.17
HLA-DQB1P01920 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.14■□□□□ 0.17
HLA-DQB1P01920 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC16.14■□□□□ 0.17
HLA-DQB1P01920 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DQB1P01920 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DQB1P01920 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DQB1P01920 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DQB1P01920 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DQB1P01920 AL499627.1-201ENST00000569373 2188 ntBASIC16.14■□□□□ 0.17
HLA-DQB1P01920 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DQB1P01920 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.14■□□□□ 0.17
HLA-DQB1P01920 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
HLA-DQB1P01920 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DQB1P01920 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DQB1P01920 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DQB1P01920 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DQB1P01920 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DQB1P01920 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DQB1P01920 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
HLA-DQB1P01920 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
HLA-DQB1P01920 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
HLA-DQB1P01920 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.13■□□□□ 0.17
HLA-DQB1P01920 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DQB1P01920 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.13■□□□□ 0.17
HLA-DQB1P01920 METTL26-203ENST00000397664 604 ntTSL 2 BASIC16.13■□□□□ 0.17
HLA-DQB1P01920 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DQB1P01920 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DQB1P01920 AC093787.1-201ENST00000450396 207 ntBASIC16.13■□□□□ 0.17
HLA-DQB1P01920 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DQB1P01920 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC16.13■□□□□ 0.17
HLA-DQB1P01920 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC16.13■□□□□ 0.17
HLA-DQB1P01920 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC16.13■□□□□ 0.17
HLA-DQB1P01920 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC16.13■□□□□ 0.17
HLA-DQB1P01920 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC16.13■□□□□ 0.17
HLA-DQB1P01920 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DQB1P01920 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DQB1P01920 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DQB1P01920 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
HLA-DQB1P01920 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DQB1P01920 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
HLA-DQB1P01920 AP006587.1-201ENST00000534129 1502 ntBASIC16.13■□□□□ 0.17
HLA-DQB1P01920 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DQB1P01920 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DQB1P01920 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DQB1P01920 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DQB1P01920 AP001094.4-201ENST00000579008 2176 ntBASIC16.13■□□□□ 0.17
HLA-DQB1P01920 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DQB1P01920 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DQB1P01920 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DQB1P01920 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
HLA-DQB1P01920 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
HLA-DQB1P01920 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HLA-DQB1P01920 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.13■□□□□ 0.17
HLA-DQB1P01920 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.13■□□□□ 0.17
HLA-DQB1P01920 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DQB1P01920 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DQB1P01920 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DQB1P01920 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
HLA-DQB1P01920 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DQB1P01920 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DQB1P01920 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DQB1P01920 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.12■□□□□ 0.17
HLA-DQB1P01920 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.12■□□□□ 0.17
HLA-DQB1P01920 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DQB1P01920 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DQB1P01920 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DQB1P01920 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DQB1P01920 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HLA-DQB1P01920 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms