Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
VAPBO95292 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VAPBO95292 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VAPBO95292 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VAPBO95292 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
VAPBO95292 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.79■□□□□ 0.6
VAPBO95292 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
VAPBO95292 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
VAPBO95292 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VAPBO95292 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.79■□□□□ 0.6
VAPBO95292 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.79■□□□□ 0.6
VAPBO95292 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.79■□□□□ 0.6
VAPBO95292 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.79■□□□□ 0.6
VAPBO95292 SLC25A1P4-201ENST00000567977 778 ntBASIC18.79■□□□□ 0.6
VAPBO95292 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.79■□□□□ 0.6
VAPBO95292 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VAPBO95292 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
VAPBO95292 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VAPBO95292 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.79■□□□□ 0.6
VAPBO95292 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VAPBO95292 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VAPBO95292 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.79■□□□□ 0.6
VAPBO95292 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VAPBO95292 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
VAPBO95292 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
VAPBO95292 RCC2P3-201ENST00000418112 1537 ntBASIC18.79■□□□□ 0.6
VAPBO95292 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
VAPBO95292 AL357033.4-201ENST00000617703 1807 ntBASIC18.79■□□□□ 0.6
VAPBO95292 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VAPBO95292 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VAPBO95292 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
VAPBO95292 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
VAPBO95292 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.78■□□□□ 0.6
VAPBO95292 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
VAPBO95292 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VAPBO95292 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
VAPBO95292 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
VAPBO95292 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VAPBO95292 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
VAPBO95292 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VAPBO95292 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.78■□□□□ 0.6
VAPBO95292 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VAPBO95292 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
VAPBO95292 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.78■□□□□ 0.6
VAPBO95292 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.78■□□□□ 0.6
VAPBO95292 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.78■□□□□ 0.6
VAPBO95292 Z99916.2-201ENST00000604037 246 ntBASIC18.78■□□□□ 0.6
VAPBO95292 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
VAPBO95292 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.78■□□□□ 0.6
VAPBO95292 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
VAPBO95292 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
VAPBO95292 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.78■□□□□ 0.6
VAPBO95292 AC096733.2-201ENST00000609937 1394 ntBASIC18.78■□□□□ 0.6
VAPBO95292 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VAPBO95292 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
VAPBO95292 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VAPBO95292 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.77■□□□□ 0.6
VAPBO95292 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
VAPBO95292 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VAPBO95292 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VAPBO95292 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.77■□□□□ 0.6
VAPBO95292 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.77■□□□□ 0.6
VAPBO95292 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.77■□□□□ 0.6
VAPBO95292 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VAPBO95292 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.77■□□□□ 0.6
VAPBO95292 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.77■□□□□ 0.6
VAPBO95292 DGCR10-201ENST00000609839 495 ntBASIC18.77■□□□□ 0.6
VAPBO95292 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
VAPBO95292 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VAPBO95292 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.77■□□□□ 0.6
VAPBO95292 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
VAPBO95292 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.77■□□□□ 0.59
VAPBO95292 AC135050.7-201ENST00000624508 2218 ntBASIC18.77■□□□□ 0.59
VAPBO95292 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
VAPBO95292 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
VAPBO95292 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
VAPBO95292 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
VAPBO95292 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VAPBO95292 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VAPBO95292 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.76■□□□□ 0.59
VAPBO95292 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
VAPBO95292 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.76■□□□□ 0.59
VAPBO95292 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
VAPBO95292 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VAPBO95292 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.76■□□□□ 0.59
VAPBO95292 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.76■□□□□ 0.59
VAPBO95292 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.76■□□□□ 0.59
VAPBO95292 MFAP1P1-201ENST00000442257 1255 ntBASIC18.76■□□□□ 0.59
VAPBO95292 AL355355.2-201ENST00000442321 338 ntBASIC18.76■□□□□ 0.59
VAPBO95292 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.76■□□□□ 0.59
VAPBO95292 AC097488.1-201ENST00000507834 756 ntBASIC18.76■□□□□ 0.59
VAPBO95292 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.76■□□□□ 0.59
VAPBO95292 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.76■□□□□ 0.59
VAPBO95292 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.76■□□□□ 0.59
VAPBO95292 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.76■□□□□ 0.59
VAPBO95292 REXO1L10P-201ENST00000615707 1290 ntBASIC18.76■□□□□ 0.59
VAPBO95292 REXO1L12P-201ENST00000622156 912 ntBASIC18.76■□□□□ 0.59
VAPBO95292 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
VAPBO95292 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VAPBO95292 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms