Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
LTN1O94822 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
LTN1O94822 GUSBP12-201ENST00000513727 720 ntBASIC24.75■■□□□ 1.55
LTN1O94822 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
LTN1O94822 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC24.75■■□□□ 1.55
LTN1O94822 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC24.75■■□□□ 1.55
LTN1O94822 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC24.75■■□□□ 1.55
LTN1O94822 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
LTN1O94822 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
LTN1O94822 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
LTN1O94822 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
LTN1O94822 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
LTN1O94822 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC24.75■■□□□ 1.55
LTN1O94822 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC24.75■■□□□ 1.55
LTN1O94822 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC24.75■■□□□ 1.55
LTN1O94822 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC24.75■■□□□ 1.55
LTN1O94822 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
LTN1O94822 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
LTN1O94822 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC24.75■■□□□ 1.55
LTN1O94822 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
LTN1O94822 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
LTN1O94822 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC24.75■■□□□ 1.55
LTN1O94822 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
LTN1O94822 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
LTN1O94822 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC24.75■■□□□ 1.55
LTN1O94822 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC24.75■■□□□ 1.55
LTN1O94822 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC24.75■■□□□ 1.55
LTN1O94822 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC24.75■■□□□ 1.55
LTN1O94822 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
LTN1O94822 AF238378.1-201ENST00000526806 358 ntBASIC24.75■■□□□ 1.55
LTN1O94822 REEP1-209ENST00000541910 969 ntTSL 2 BASIC24.75■■□□□ 1.55
LTN1O94822 ABR-217ENST00000572441 563 ntTSL 4 BASIC24.75■■□□□ 1.55
LTN1O94822 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
LTN1O94822 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
LTN1O94822 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
LTN1O94822 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
LTN1O94822 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
LTN1O94822 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
LTN1O94822 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
LTN1O94822 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
LTN1O94822 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC24.74■■□□□ 1.55
LTN1O94822 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC24.74■■□□□ 1.55
LTN1O94822 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC24.74■■□□□ 1.55
LTN1O94822 AL662844.1-201ENST00000546340 181 ntBASIC24.74■■□□□ 1.55
LTN1O94822 FICD-205ENST00000552758 603 ntTSL 2 BASIC24.74■■□□□ 1.55
LTN1O94822 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC24.74■■□□□ 1.55
LTN1O94822 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
LTN1O94822 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC24.74■■□□□ 1.55
LTN1O94822 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
LTN1O94822 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
LTN1O94822 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC24.74■■□□□ 1.55
LTN1O94822 BID-204ENST00000399767 2129 ntTSL 2 BASIC24.73■■□□□ 1.55
LTN1O94822 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
LTN1O94822 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
LTN1O94822 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
LTN1O94822 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC24.73■■□□□ 1.55
LTN1O94822 LSM5-204ENST00000409909 740 ntTSL 2 BASIC24.73■■□□□ 1.55
LTN1O94822 RN7SL606P-201ENST00000472779 293 ntBASIC24.73■■□□□ 1.55
LTN1O94822 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC24.73■■□□□ 1.55
LTN1O94822 AC113404.2-201ENST00000507884 177 ntBASIC24.73■■□□□ 1.55
LTN1O94822 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC24.73■■□□□ 1.55
LTN1O94822 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
LTN1O94822 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC24.73■■□□□ 1.55
LTN1O94822 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC24.73■■□□□ 1.55
LTN1O94822 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
LTN1O94822 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
LTN1O94822 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
LTN1O94822 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
LTN1O94822 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
LTN1O94822 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
LTN1O94822 UROS-202ENST00000368778 1556 ntTSL 2 BASIC24.72■■□□□ 1.55
LTN1O94822 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
LTN1O94822 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
LTN1O94822 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
LTN1O94822 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
LTN1O94822 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC24.72■■□□□ 1.55
LTN1O94822 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
LTN1O94822 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC24.72■■□□□ 1.55
LTN1O94822 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC24.72■■□□□ 1.55
LTN1O94822 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC24.72■■□□□ 1.55
LTN1O94822 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
LTN1O94822 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
LTN1O94822 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
LTN1O94822 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
LTN1O94822 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC24.71■■□□□ 1.55
LTN1O94822 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC24.71■■□□□ 1.55
LTN1O94822 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC24.71■■□□□ 1.55
LTN1O94822 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC24.71■■□□□ 1.55
LTN1O94822 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
LTN1O94822 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
LTN1O94822 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
LTN1O94822 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC24.71■■□□□ 1.55
LTN1O94822 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
LTN1O94822 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC24.71■■□□□ 1.55
LTN1O94822 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
LTN1O94822 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC24.71■■□□□ 1.55
LTN1O94822 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
LTN1O94822 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
LTN1O94822 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
LTN1O94822 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms