Protein–RNA interactions for Protein: O75439

PMPCB, Mitochondrial-processing peptidase subunit beta, humanhuman

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCBO75439 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PMPCBO75439 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PMPCBO75439 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PMPCBO75439 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PMPCBO75439 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PMPCBO75439 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PMPCBO75439 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PMPCBO75439 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PMPCBO75439 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
PMPCBO75439 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PMPCBO75439 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.97■□□□□ 0.63
PMPCBO75439 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PMPCBO75439 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PMPCBO75439 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.97■□□□□ 0.63
PMPCBO75439 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PMPCBO75439 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PMPCBO75439 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.97■□□□□ 0.63
PMPCBO75439 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.97■□□□□ 0.63
PMPCBO75439 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PMPCBO75439 SLC25A1P2-201ENST00000430693 912 ntBASIC18.97■□□□□ 0.63
PMPCBO75439 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PMPCBO75439 C2orf69P3-201ENST00000565542 1120 ntBASIC18.97■□□□□ 0.63
PMPCBO75439 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PMPCBO75439 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.97■□□□□ 0.63
PMPCBO75439 AL023803.3-201ENST00000615559 522 ntBASIC18.97■□□□□ 0.63
PMPCBO75439 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.97■□□□□ 0.63
PMPCBO75439 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PMPCBO75439 AL499627.1-201ENST00000569373 2188 ntBASIC18.97■□□□□ 0.63
PMPCBO75439 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.97■□□□□ 0.63
PMPCBO75439 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.97■□□□□ 0.63
PMPCBO75439 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PMPCBO75439 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PMPCBO75439 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PMPCBO75439 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
PMPCBO75439 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.97■□□□□ 0.63
PMPCBO75439 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PMPCBO75439 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PMPCBO75439 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
PMPCBO75439 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PMPCBO75439 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.97■□□□□ 0.63
PMPCBO75439 CYP2D8P-201ENST00000433633 1490 ntBASIC18.97■□□□□ 0.63
PMPCBO75439 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PMPCBO75439 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.96■□□□□ 0.63
PMPCBO75439 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PMPCBO75439 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
PMPCBO75439 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.96■□□□□ 0.63
PMPCBO75439 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PMPCBO75439 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PMPCBO75439 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.96■□□□□ 0.63
PMPCBO75439 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.96■□□□□ 0.63
PMPCBO75439 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PMPCBO75439 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PMPCBO75439 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
PMPCBO75439 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.96■□□□□ 0.63
PMPCBO75439 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.96■□□□□ 0.63
PMPCBO75439 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PMPCBO75439 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.96■□□□□ 0.63
PMPCBO75439 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.96■□□□□ 0.63
PMPCBO75439 MCCD1P1-208ENST00000445732 328 ntBASIC18.96■□□□□ 0.63
PMPCBO75439 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
PMPCBO75439 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.96■□□□□ 0.63
PMPCBO75439 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.96■□□□□ 0.63
PMPCBO75439 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.96■□□□□ 0.63
PMPCBO75439 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.96■□□□□ 0.63
PMPCBO75439 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.96■□□□□ 0.63
PMPCBO75439 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.96■□□□□ 0.63
PMPCBO75439 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PMPCBO75439 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
PMPCBO75439 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PMPCBO75439 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.96■□□□□ 0.63
PMPCBO75439 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PMPCBO75439 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PMPCBO75439 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.96■□□□□ 0.63
PMPCBO75439 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.96■□□□□ 0.63
PMPCBO75439 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.96■□□□□ 0.63
PMPCBO75439 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.62
PMPCBO75439 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PMPCBO75439 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.95■□□□□ 0.62
PMPCBO75439 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PMPCBO75439 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
PMPCBO75439 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.95■□□□□ 0.62
PMPCBO75439 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PMPCBO75439 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PMPCBO75439 AL109659.2-201ENST00000606809 1674 ntBASIC18.95■□□□□ 0.62
PMPCBO75439 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.95■□□□□ 0.62
PMPCBO75439 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.95■□□□□ 0.62
PMPCBO75439 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
PMPCBO75439 MMP23A-201ENST00000234610 1017 ntBASIC18.95■□□□□ 0.62
PMPCBO75439 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
PMPCBO75439 CCR12P-201ENST00000446203 998 ntBASIC18.95■□□□□ 0.62
PMPCBO75439 TSPY17P-201ENST00000450329 467 ntBASIC18.95■□□□□ 0.62
PMPCBO75439 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PMPCBO75439 AP003041.3-201ENST00000527151 707 ntBASIC18.95■□□□□ 0.62
PMPCBO75439 MIR4674-201ENST00000582457 87 ntBASIC18.95■□□□□ 0.62
PMPCBO75439 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.95■□□□□ 0.62
PMPCBO75439 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
PMPCBO75439 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PMPCBO75439 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PMPCBO75439 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
PMPCBO75439 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms