Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 STARP1-201ENST00000397973 869 ntBASIC16.82■□□□□ 0.28
ZIC3O60481 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.82■□□□□ 0.28
ZIC3O60481 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.82■□□□□ 0.28
ZIC3O60481 AC092647.4-201ENST00000457211 535 ntBASIC16.82■□□□□ 0.28
ZIC3O60481 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
ZIC3O60481 KRT18P41-201ENST00000518924 1277 ntBASIC16.82■□□□□ 0.28
ZIC3O60481 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.82■□□□□ 0.28
ZIC3O60481 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC16.82■□□□□ 0.28
ZIC3O60481 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ZIC3O60481 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.82■□□□□ 0.28
ZIC3O60481 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ZIC3O60481 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZIC3O60481 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.82■□□□□ 0.28
ZIC3O60481 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZIC3O60481 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
ZIC3O60481 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZIC3O60481 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZIC3O60481 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZIC3O60481 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ZIC3O60481 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZIC3O60481 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZIC3O60481 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.81■□□□□ 0.28
ZIC3O60481 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZIC3O60481 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZIC3O60481 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
ZIC3O60481 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
ZIC3O60481 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZIC3O60481 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ZIC3O60481 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZIC3O60481 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ZIC3O60481 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZIC3O60481 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZIC3O60481 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ZIC3O60481 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.81■□□□□ 0.28
ZIC3O60481 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.81■□□□□ 0.28
ZIC3O60481 AL359075.1-203ENST00000462729 1002 ntBASIC16.81■□□□□ 0.28
ZIC3O60481 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.81■□□□□ 0.28
ZIC3O60481 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.81■□□□□ 0.28
ZIC3O60481 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.81■□□□□ 0.28
ZIC3O60481 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZIC3O60481 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.81■□□□□ 0.28
ZIC3O60481 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZIC3O60481 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
ZIC3O60481 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZIC3O60481 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.81■□□□□ 0.28
ZIC3O60481 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZIC3O60481 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZIC3O60481 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.81■□□□□ 0.28
ZIC3O60481 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZIC3O60481 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ZIC3O60481 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.8■□□□□ 0.28
ZIC3O60481 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ZIC3O60481 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ZIC3O60481 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZIC3O60481 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ZIC3O60481 BX323043.1-201ENST00000641006 1765 ntBASIC16.8■□□□□ 0.28
ZIC3O60481 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.8■□□□□ 0.28
ZIC3O60481 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.8■□□□□ 0.28
ZIC3O60481 ARMC10P1-201ENST00000313754 855 ntBASIC16.8■□□□□ 0.28
ZIC3O60481 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZIC3O60481 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ZIC3O60481 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZIC3O60481 RASA4DP-201ENST00000460726 1199 ntBASIC16.8■□□□□ 0.28
ZIC3O60481 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.8■□□□□ 0.28
ZIC3O60481 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.8■□□□□ 0.28
ZIC3O60481 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.8■□□□□ 0.28
ZIC3O60481 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.8■□□□□ 0.28
ZIC3O60481 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.8■□□□□ 0.28
ZIC3O60481 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
ZIC3O60481 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.8■□□□□ 0.28
ZIC3O60481 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.8■□□□□ 0.28
ZIC3O60481 MYC-208ENST00000641036 567 ntBASIC16.8■□□□□ 0.28
ZIC3O60481 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZIC3O60481 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.8■□□□□ 0.28
ZIC3O60481 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZIC3O60481 AC093525.10-201ENST00000625130 1569 ntBASIC16.8■□□□□ 0.28
ZIC3O60481 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ZIC3O60481 AC018445.3-201ENST00000624177 1945 ntBASIC16.8■□□□□ 0.28
ZIC3O60481 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ZIC3O60481 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
ZIC3O60481 KRT8P50-201ENST00000562022 1438 ntBASIC16.79■□□□□ 0.28
ZIC3O60481 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
ZIC3O60481 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ZIC3O60481 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ZIC3O60481 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.79■□□□□ 0.28
ZIC3O60481 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ZIC3O60481 CROCCP3-202ENST00000420820 1947 ntBASIC16.79■□□□□ 0.28
ZIC3O60481 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.79■□□□□ 0.28
ZIC3O60481 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ZIC3O60481 SPDYE15P-201ENST00000424157 909 ntBASIC16.79■□□□□ 0.28
ZIC3O60481 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.79■□□□□ 0.28
ZIC3O60481 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
ZIC3O60481 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
ZIC3O60481 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.79■□□□□ 0.28
ZIC3O60481 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
ZIC3O60481 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ZIC3O60481 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ZIC3O60481 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ZIC3O60481 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ZIC3O60481 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 198.2 ms