Protein–RNA interactions for Protein: O43736

ITM2A, Integral membrane protein 2A, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2AO43736 AL357033.4-201ENST00000617703 1807 ntBASIC18.35■□□□□ 0.53
ITM2AO43736 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ITM2AO43736 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.34■□□□□ 0.53
ITM2AO43736 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
ITM2AO43736 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
ITM2AO43736 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.34■□□□□ 0.53
ITM2AO43736 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
ITM2AO43736 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.34■□□□□ 0.53
ITM2AO43736 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ITM2AO43736 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.34■□□□□ 0.53
ITM2AO43736 AC139713.2-201ENST00000641328 2723 ntBASIC18.34■□□□□ 0.53
ITM2AO43736 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ITM2AO43736 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
ITM2AO43736 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
ITM2AO43736 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.34■□□□□ 0.53
ITM2AO43736 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ITM2AO43736 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ITM2AO43736 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ITM2AO43736 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.34■□□□□ 0.53
ITM2AO43736 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.34■□□□□ 0.53
ITM2AO43736 Z85996.1-201ENST00000494644 937 ntBASIC18.34■□□□□ 0.53
ITM2AO43736 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.34■□□□□ 0.53
ITM2AO43736 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.34■□□□□ 0.53
ITM2AO43736 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
ITM2AO43736 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
ITM2AO43736 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
ITM2AO43736 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.34■□□□□ 0.53
ITM2AO43736 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ITM2AO43736 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ITM2AO43736 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ITM2AO43736 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ITM2AO43736 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.34■□□□□ 0.53
ITM2AO43736 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
ITM2AO43736 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ITM2AO43736 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
ITM2AO43736 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ITM2AO43736 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
ITM2AO43736 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
ITM2AO43736 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.33■□□□□ 0.53
ITM2AO43736 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.33■□□□□ 0.53
ITM2AO43736 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ITM2AO43736 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ITM2AO43736 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.33■□□□□ 0.53
ITM2AO43736 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ITM2AO43736 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.33■□□□□ 0.52
ITM2AO43736 POM121L13P-201ENST00000422362 380 ntBASIC18.33■□□□□ 0.52
ITM2AO43736 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.33■□□□□ 0.52
ITM2AO43736 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.33■□□□□ 0.52
ITM2AO43736 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ITM2AO43736 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.33■□□□□ 0.52
ITM2AO43736 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
ITM2AO43736 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.33■□□□□ 0.52
ITM2AO43736 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.33■□□□□ 0.52
ITM2AO43736 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.33■□□□□ 0.52
ITM2AO43736 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.33■□□□□ 0.52
ITM2AO43736 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.33■□□□□ 0.52
ITM2AO43736 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ITM2AO43736 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.33■□□□□ 0.52
ITM2AO43736 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ITM2AO43736 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ITM2AO43736 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ITM2AO43736 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
ITM2AO43736 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ITM2AO43736 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.33■□□□□ 0.52
ITM2AO43736 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
ITM2AO43736 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ITM2AO43736 KRT8P11-201ENST00000409686 1436 ntBASIC18.32■□□□□ 0.52
ITM2AO43736 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
ITM2AO43736 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ITM2AO43736 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ITM2AO43736 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ITM2AO43736 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ITM2AO43736 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.32■□□□□ 0.52
ITM2AO43736 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ITM2AO43736 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ITM2AO43736 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
ITM2AO43736 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ITM2AO43736 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
ITM2AO43736 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ITM2AO43736 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.32■□□□□ 0.52
ITM2AO43736 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
ITM2AO43736 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.32■□□□□ 0.52
ITM2AO43736 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.32■□□□□ 0.52
ITM2AO43736 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.32■□□□□ 0.52
ITM2AO43736 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.32■□□□□ 0.52
ITM2AO43736 PRKY-204ENST00000533551 1019 ntBASIC18.32■□□□□ 0.52
ITM2AO43736 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.32■□□□□ 0.52
ITM2AO43736 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.32■□□□□ 0.52
ITM2AO43736 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.32■□□□□ 0.52
ITM2AO43736 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
ITM2AO43736 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
ITM2AO43736 AC012313.1-201ENST00000593393 3059 ntBASIC18.32■□□□□ 0.52
ITM2AO43736 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ITM2AO43736 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.32■□□□□ 0.52
ITM2AO43736 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ITM2AO43736 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ITM2AO43736 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ITM2AO43736 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ITM2AO43736 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ITM2AO43736 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms