Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
TRAF3IP2O43734 AL499627.1-201ENST00000569373 2188 ntBASIC16.64■□□□□ 0.25
TRAF3IP2O43734 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TRAF3IP2O43734 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAF3IP2O43734 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAF3IP2O43734 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TRAF3IP2O43734 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAF3IP2O43734 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.64■□□□□ 0.25
TRAF3IP2O43734 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
TRAF3IP2O43734 MIR3180-5-201ENST00000583743 153 ntBASIC16.64■□□□□ 0.25
TRAF3IP2O43734 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAF3IP2O43734 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAF3IP2O43734 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAF3IP2O43734 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
TRAF3IP2O43734 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAF3IP2O43734 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAF3IP2O43734 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
TRAF3IP2O43734 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.64■□□□□ 0.25
TRAF3IP2O43734 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.64■□□□□ 0.25
TRAF3IP2O43734 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.64■□□□□ 0.25
TRAF3IP2O43734 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRAF3IP2O43734 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAF3IP2O43734 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRAF3IP2O43734 KRT8P45-201ENST00000414328 1447 ntBASIC16.63■□□□□ 0.25
TRAF3IP2O43734 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAF3IP2O43734 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TRAF3IP2O43734 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAF3IP2O43734 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAF3IP2O43734 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAF3IP2O43734 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAF3IP2O43734 INGX-201ENST00000359239 846 ntBASIC16.63■□□□□ 0.25
TRAF3IP2O43734 MIR564-202ENST00000385049 94 ntBASIC16.63■□□□□ 0.25
TRAF3IP2O43734 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRAF3IP2O43734 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRAF3IP2O43734 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.63■□□□□ 0.25
TRAF3IP2O43734 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.63■□□□□ 0.25
TRAF3IP2O43734 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRAF3IP2O43734 AC010653.2-201ENST00000623505 997 ntBASIC16.63■□□□□ 0.25
TRAF3IP2O43734 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAF3IP2O43734 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAF3IP2O43734 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAF3IP2O43734 AC036111.1-201ENST00000533973 1582 ntBASIC16.63■□□□□ 0.25
TRAF3IP2O43734 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAF3IP2O43734 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.63■□□□□ 0.25
TRAF3IP2O43734 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAF3IP2O43734 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAF3IP2O43734 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TRAF3IP2O43734 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF3IP2O43734 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF3IP2O43734 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF3IP2O43734 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
TRAF3IP2O43734 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF3IP2O43734 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF3IP2O43734 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF3IP2O43734 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
TRAF3IP2O43734 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF3IP2O43734 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.62■□□□□ 0.25
TRAF3IP2O43734 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF3IP2O43734 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF3IP2O43734 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF3IP2O43734 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.62■□□□□ 0.25
TRAF3IP2O43734 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.62■□□□□ 0.25
TRAF3IP2O43734 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF3IP2O43734 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF3IP2O43734 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF3IP2O43734 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF3IP2O43734 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF3IP2O43734 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
TRAF3IP2O43734 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.62■□□□□ 0.25
TRAF3IP2O43734 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.62■□□□□ 0.25
TRAF3IP2O43734 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF3IP2O43734 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF3IP2O43734 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF3IP2O43734 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.62■□□□□ 0.25
TRAF3IP2O43734 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF3IP2O43734 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF3IP2O43734 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF3IP2O43734 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF3IP2O43734 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF3IP2O43734 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF3IP2O43734 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAF3IP2O43734 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.62■□□□□ 0.25
TRAF3IP2O43734 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.62■□□□□ 0.25
TRAF3IP2O43734 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
TRAF3IP2O43734 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.62■□□□□ 0.25
TRAF3IP2O43734 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
TRAF3IP2O43734 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAF3IP2O43734 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRAF3IP2O43734 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TRAF3IP2O43734 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAF3IP2O43734 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRAF3IP2O43734 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
TRAF3IP2O43734 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAF3IP2O43734 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TRAF3IP2O43734 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC16.61■□□□□ 0.25
TRAF3IP2O43734 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAF3IP2O43734 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRAF3IP2O43734 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRAF3IP2O43734 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRAF3IP2O43734 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms